3D spatial quantification of lymphocyte infiltration and collagen features in the tumor microenvironment using a novel assay: 3D I/O Pro™ C Stoltzfus, J Wilson, N Grant, A Alvarsson, A DeWitt, D Simmons, B Olin, ... Cancer Research 84 (6_Supplement), 2309-2309, 2024 | | 2024 |
Visual Assessment of 2-Dimensional Levels Within 3-Dimensional Pathology Data Sets of Prostate Needle Biopsies Reveals Substantial Spatial Heterogeneity C Koyuncu, A Janowczyk, X Farre, T Pathak, T Mirtti, PL Fernandez, ... Laboratory Investigation 103 (12), 100265, 2023 | 3 | 2023 |
1509-H Quantitative assessment of the tumor microenvironment using the Aurora™ 3D Spatial Biology Platform C Stoltzfus, A Alvarsson, A DeWitt, J Wilson, N Grant, D Simmons, B Olin, ... Journal for ImmunoTherapy of Cancer 11 (Suppl 2), 2023 | | 2023 |
Visual assessment of 2D levels within 3D pathology datasets of prostate needle biopsies reveals substantial spatial heterogeneity. C Koyuncu, A Janowczyk, X Farre, T Pathak, T Mirtti, PL Fernandez, ... Laboratory Investigation; a Journal of Technical Methods and Pathology …, 2023 | | 2023 |
3D SPATIAL BIOLOGY ASSESSMENT OF LIVER BIOPSIES FROM PATIENTS WITH NASH AND NAFLD A Alvarsson, B Olin, C Stoltzfus, R Loomba, S Singh, MA Valasek, ... HEPATOLOGY 78, S750-S751, 2023 | | 2023 |
Evaluation of initial prostate cancer biopsies utilizing 3D open‐top light‐sheet microscopy for detection of early disease G Mo, NP Reder, MT Schweizer The Prostate 83 (11), 1121-1124, 2023 | | 2023 |
Nondestructive 3D pathology with analysis of nuclear features for prostate cancer risk assessment R Serafin, C Koyuncu, W Xie, H Huang, AK Glaser, NP Reder, ... The Journal of Pathology 260 (4), 390-401, 2023 | 6 | 2023 |
3D open-top light-sheet microscopy and 3D microdissection of neuoadjuvant-treated primary prostate cancer reveals latent subclonal mutations. N Reder, CC Pritchard, EQ Konnick, H Huang, A Lerma, AK Glaser, ... Journal of Clinical Oncology 41 (16_suppl), e17109-e17109, 2023 | | 2023 |
Quantitative 3D assessment of the lung cancer microenvironment using multi-resolution open-top light-sheet microscopy. CR Stoltzfus, N Reder, A Alvarsson, A DeWitt, C Storey, J Wilson, N Grant, ... Journal of Clinical Oncology 41 (16_suppl), 2616-2616, 2023 | 1 | 2023 |
1025 COMPUTER ASSISTED 3D ANALYSIS OF VILLOUS MORPHOLOGY IN CELIAC DISEASE A DeWitt, D Simmons, J Wilson, C Storey, C Stoltzfus, N Reder Gastroenterology 164 (6), S-219, 2023 | | 2023 |
3D assessment of the lung cancer microenvironment using multi-resolution open-top light-sheet microscopy A Alvarsson, C Storey, BO Pope, C Stoltzfus, R Vierkant, J Tufariello, ... Cancer Research 83 (7_Supplement), 6624-6624, 2023 | | 2023 |
Abstract P6-04-18: Rapid diagnosis of breast biopsies with open-top light-sheet microscopy BEO Pope, S Dintzis, EU Parker, R Alvarez, A Alvarsson, H Rahbar, ... Cancer Research 83 (5_Supplement), P6-04-18-P6-04-18, 2023 | | 2023 |
3D QUANTITATIVE ASSESSMENT OF LIVER STEATOSIS AND FIBROSIS IN NONALCOHOLIC STEATOHEPATITIS (NASH) USING MULTI-RESOLUTION OPEN-TOP LIGHT-SHEET MICROSCOPY HE Oz, KS Oh, A DeWitt, J Wilson, C Storey, BO Pope, C Stoltzfus, ... HEPATOLOGY 76, S847-S848, 2022 | | 2022 |
Ablating Lgr5-expressing prostatic stromal cells activates the ERK-mediated mechanosensory signaling and disrupts prostate tissue homeostasis X Wei, L Zhang, Y Zhang, C Cooper, C Brewer, CF Tsai, YT Wang, M Glaz, ... Cell reports 40 (10), 2022 | 4 | 2022 |
Analysis of prostate glands using three-dimensional (3D) morphology features of prostate from 3D pathology images A Madabhushi, C Koyuncu, C Lu, NP Reder, JTC Liu US Patent 11,361,437, 2022 | 1 | 2022 |
152e: DIAGNOSIS OF HIRSCHSPRUNG DISEASE BY 3D SPATIAL IMAGING OF COLONIC INNERVATION C Stoltzfus, A DeWitt, C Brewer, M Valasek, N Reder, R Kapur Gastroenterology 162 (7), S-1390-S-1391, 2022 | | 2022 |
A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues AK Glaser, KW Bishop, LA Barner, EA Susaki, SI Kubota, G Gao, ... Nature methods 19 (5), 613-619, 2022 | 75 | 2022 |
Deep Learning-assisted 3D Segmentation and Analysis of Prostate Glands for Cancer Risk Stratification W Xie, NP Reder, C Koyuncu, P Leo, S Hawley, H Huang, C Mao, ... Microscopy Histopathology and Analytics, MS4A. 4, 2022 | | 2022 |
3D Light-Sheet Microscopy and Microdissection of Primary Prostate Cancer Reveals Important Latent Sub-clonal Mutations L Lerma, C Pritchard, E Konnick, M Haffner, M Schweizer, H Huang, ... LABORATORY INVESTIGATION 102 (SUPPL 1), 620-620, 2022 | | 2022 |
Tumor Volume is a Risk Factor of Biochemical Recurrence: a 20-year Retrospective Case Series M Chambers, F Vakar-Lopez, M Tretiakova, N Reder, L True LABORATORY INVESTIGATION 102 (SUPPL 1), 578-579, 2022 | | 2022 |