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Geoffrey D. Hannigan, PhD
Geoffrey D. Hannigan, PhD
Merck
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Title
Cited by
Cited by
Year
Skin microbiome surveys are strongly influenced by experimental design
JS Meisel, GD Hannigan, AS Tyldsley, AJ SanMiguel, BP Hodkinson, ...
Journal of Investigative Dermatology 136 (5), 947-956, 2016
3182016
The human skin double-stranded DNA virome: topographical and temporal diversity, genetic enrichment, and dynamic associations with the host microbiome
GD Hannigan, JS Meisel, AS Tyldsley, Q Zheng, BP Hodkinson, ...
MBio 6 (5), 10.1128/mbio. 01578-15, 2015
2482015
A deep learning genome-mining strategy for biosynthetic gene cluster prediction
GD Hannigan, D Prihoda, A Palicka, J Soukup, O Klempir, L Rampula, ...
Nucleic acids research 47 (18), e110-e110, 2019
2022019
Diagnostic potential and interactive dynamics of the colorectal cancer virome
GD Hannigan, MB Duhaime, MT Ruffin IV, CC Koumpouras, PD Schloss
MBio 9 (6), 10.1128/mbio. 02248-18, 2018
1822018
Microbial ecology of the skin in the era of metagenomics and molecular microbiology
GD Hannigan, EA Grice
Cold Spring Harbor perspectives in medicine 3 (12), a015362, 2013
1262013
Current concepts and ongoing research in the prevention and treatment of open fracture infections
GD Hannigan, N Pulos, EA Grice, S Mehta
Advances in wound care 4 (1), 59-74, 2015
622015
Culture‐independent pilot study of microbiota colonizing open fractures and association with severity, mechanism, location, and complication from presentation to early …
GD Hannigan, BP Hodkinson, K McGinnis, AS Tyldsley, JB Anari, ...
Journal of orthopaedic research 32 (4), 597-605, 2014
552014
Biogeography and environmental conditions shape bacteriophage-bacteria networks across the human microbiome
GD Hannigan, MB Duhaime, D Koutra, PD Schloss
PLoS computational biology 14 (4), e1006099, 2018
442018
Evolutionary and functional implications of hypervariable loci within the skin virome
GD Hannigan, Q Zheng, JS Meisel, SS Minot, FD Bushman, EA Grice
PeerJ 5, e2959, 2017
352017
The application potential of machine learning and genomics for understanding natural product diversity, chemistry, and therapeutic translatability
D Prihoda, JM Maritz, O Klempir, D Dzamba, CH Woelk, DJ Hazuda, ...
Natural Product Reports 38 (6), 1100-1108, 2021
332021
The microbiota of traumatic, open fracture wounds is associated with mechanism of injury
C Bartow‐McKenney, GD Hannigan, J Horwinski, P Hesketh, AD Horan, ...
Wound Repair and Regeneration 26 (2), 127-135, 2018
262018
4th, Koumpouras CC, Schloss PD
GD Hannigan, MB Duhaime, MT Ruffin
Diagnostic potential and interactive dynamics of the colorectal cancer …, 2018
202018
Mycobacterium minnesotense sp. nov., a photochromogenic bacterium isolated from sphagnum peat bogs
GD Hannigan, B Krivogorsky, D Fordice, JB Welch, JL Dahl
International journal of systematic and evolutionary microbiology 63 (Pt_1 …, 2013
202013
The human skin double-stranded DNA virome: topographical and temporal diversity, genetic enrichment, and dynamic associations with the host microbiome. mBio. 2015; 6 (5): e01578–15
GD Hannigan, JS Meisel, AS Tyldsley, Q Zheng, BP Hodkinson, ...
PubMed Abstract| Publisher Full Text| Free Full Text, 2015
172015
Advanced textbook on gene transfer, gene therapy and genetic pharmacology: principles, delivery and pharmacological and biomedical applications of nucleotide-based therapies
D Scherman
World Scientific, 2019
132019
Diagnostic potential and interactive dynamics of the colorectal cancer virome. mBio 9: e02248-18
GD Hannigan, MB Duhaime, MT Ruffin, CC Koumpouras, PD Schloss
132018
Ten simple rules to increase computational skills among biologists with Code Clubs
AK Hagan, NA Lesniak, MJ Balunas, L Bishop, WL Close, MD Doherty, ...
PLOS Computational Biology 16 (8), e1008119, 2020
82020
Evolutionary and functional implications of hypervariable loci within the skin virome. PeerJ 5: e2959
GD Hannigan, Q Zheng, JS Meisel, SS Minot, FD Bushman, EA Grice
82017
Vaccine hyporesponse induced by individual antibiotic treatment in mice and non-human primates is diminished upon recovery of the gut microbiome
G Swaminathan, M Citron, J Xiao, JE Norton Jr, AL Reens, BD Topçuoğlu, ...
Vaccines 9 (11), 1340, 2021
62021
Identifying biosynthetic gene clusters
GD Hannigan, D Prihoda, J Soukup, CH Woelk, DA Bitton
US Patent App. 16/362,236, 2020
42020
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Articles 1–20