| A scalable solution for tumor mutational burden from formalin-fixed, paraffin-embedded samples using the Oncomine Tumor Mutation Load Assay R Chaudhary, L Quagliata, JP Martin, I Alborelli, D Cyanam, V Mittal, ... Translational lung cancer research 7 (6), 616, 2018 | 42 | 2018 |
| A verified genomic reference sample for assessing performance of cancer panels detecting small variants of low allele frequency W Jones, B Gong, N Novoradovskaya, D Li, R Kusko, TA Richmond, ... Genome biology 22, 1-38, 2021 | 30 | 2021 |
| Characterization and potential functional significance of human-chimpanzee large INDEL variation N Polavarapu, G Arora, VK Mittal, JF McDonald Mobile DNA 2, 1-13, 2011 | 28 | 2011 |
| Cross-oncopanel study reveals high sensitivity and accuracy with overall analytical performance depending on genomic regions B Gong, D Li, R Kusko, N Novoradovskaya, Y Zhang, S Wang, ... Genome biology 22, 1-23, 2021 | 21 | 2021 |
| De novo assembly and characterization of breast cancer transcriptomes identifies large numbers of novel fusion-gene transcripts of potential functional significance VK Mittal, JF McDonald BMC medical genomics 10, 1-20, 2017 | 18 | 2017 |
| RetroPred: A tool for prediction, classification and extraction of non-LTR retrotransposons (LINEs & SINEs) from the genome by integrating PALS, PILER, MEME and ANN PK Naik, VK Mittal, S Gupta Bioinformation 2 (6), 263, 2008 | 8 | 2008 |
| Integrated sequence and expression analysis of ovarian cancer structural variants underscores the importance of gene fusion regulation VK Mittal, JF McDonald BMC medical genomics 8, 1-12, 2015 | 7 | 2015 |
| R-SAP: a multi-threading computational pipeline for the characterization of high-throughput RNA-sequencing data VK Mittal, JF McDonald Nucleic acids research 40 (9), e67-e67, 2012 | 7 | 2012 |
| Clinical sequencing identifies potential actionable alterations in a high rate of urachal and primary bladder adenocarcinomas M Varadi, N Nagy, H Reis, B Hadaschik, C Niedworok, O Modos, ... Cancer medicine 12 (7), 9041-9054, 2023 | 6 | 2023 |
| Deep oncopanel sequencing reveals within block position-dependent quality degradation in FFPE processed samples Y Zhang, TM Blomquist, R Kusko, D Stetson, Z Zhang, L Yin, R Sebra, ... Genome Biology 23 (1), 141, 2022 | 6 | 2022 |
| Multisite verification of the accuracy of a multi-gene next generation sequencing panel for detection of mutations and copy number alterations in solid tumours J Bartlett, Y Amemiya, H Arts, J Bayani, B Eng, D Grafodatskaya, ... PLoS One 16 (10), e0258188, 2021 | 6 | 2021 |
| MicroRNAs indirectly regulate other microRNAs in ovarian cancer cells SW Shahab, LV Matyunina, VK Mittal, L Wang, CG Hill, L Walker, ... British Journal of Medicine and Medical Research 2 (2), 172-194, 2012 | 5 | 2012 |
| Deep oncopanel sequencing reveals fixation time-and within block position-dependent quality degradation in FFPE processed samples SEQC2 Oncopanel Sequencing Working Group, Y Zhang, TM Blomquist, ... bioRxiv, 2021.04. 06.438687, 2021 | 2 | 2021 |
| Improvement of tumor mutation burden measurement by removal of deaminated bases in FFPE DNA W Tom, R Chaudhary, V Mittal, D Cyanam, I Casuga, E Wong-Ho, ... Cancer Research 79 (13_Supplement), 1701-1701, 2019 | 2 | 2019 |
| Evaluation of a rapid automated next generation sequencing assay for precision medicine in acute myeloid leukemia GM Andrew, LW Dillon, M Saeed, TC Chang, SK Narava, EM Mosher, ... Blood 138, 4444, 2021 | 1 | 2021 |
| Rapid and Automated Genomic Profiling of Lung Cancer Solid Tumor and Liquid Biopsy V Mittal, S Sadis, C Bai, A Bigley, K Bramlett, H Chao, N Ezzedine, ... JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S124-S124, 2023 | | 2023 |
| Comprehensive Genomic Profiling of Early Hormone Receptor Positive Breast Cancer Reveals Diverse Genomic Alterations J Bayani, S Sadis, C Crozier, V Mittal, A Sundby, E Woroszchuk, ... JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S128-S128, 2023 | | 2023 |
| Rapid and Automated Comprehensive Genomic Profiling to Assess Single-Gene and Complex Biomarkers Including Genomic Instability M Gupta, Y Jin, E Norris, Y Wang, M Toro, A Phan, Y Zhu, D Wong, ... JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S108-S109, 2023 | | 2023 |
| Fully automated comprehensive genomic profiling for detection of cancer variants, gene fusions, and complex oncology endpoints GM Lowman, D Cyanam, E Norris, M Toro, C Nemes, T Puranik, Y Zhu, ... Cancer Research 83 (7_Supplement), 232-232, 2023 | | 2023 |
| Clinical management and decision making in early ER-positive breast cancers through improved prognosis and pathway directed molecular profiling JM Bartlett, C Crozier, VK Mittal, D Dion, AD Luca, AE Sundby, ... Cancer Research 83 (7_Supplement), 5548-5548, 2023 | | 2023 |
JF McDonaldGeorgia Tech, U Georgia, UC Davis, UC San Diego, Iowa StateVerified email at biology.gatech.edu
