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Can Ergen
Can Ergen
Universität Hamburg
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Year
Liver inflammation abrogates immunological tolerance induced by Kupffer cells
F Heymann, J Peusquens, I Ludwig‐Portugall, M Kohlhepp, C Ergen, ...
Hepatology 62 (1), 279-291, 2015
3702015
Chemokine (C‐C motif) receptor 2–positive monocytes aggravate the early phase of acetaminophen‐induced acute liver injury
JC Mossanen, O Krenkel, C Ergen, O Govaere, A Liepelt, T Puengel, ...
Hepatology 64 (5), 1667-1682, 2016
3132016
M-CSF and GM-CSF receptor signaling differentially regulate monocyte maturation and macrophage polarization in the tumor microenvironment
E Van Overmeire, B Stijlemans, F Heymann, J Keirsse, Y Morias, Y Elkrim, ...
Cancer research 76 (1), 35-42, 2016
2362016
Molecular and functional heterogeneity of IL-10-producing CD4+ T cells
L Brockmann, S Soukou, B Steglich, P Czarnewski, L Zhao, S Wende, ...
Nature communications 9 (1), 5457, 2018
1172018
DestVI identifies continuums of cell types in spatial transcriptomics data
R Lopez, B Li, H Keren-Shaul, P Boyeau, M Kedmi, D Pilzer, A Jelinski, ...
Nature biotechnology 40 (9), 1360-1369, 2022
902022
The CCR2+ macrophage subset promotes pathogenic angiogenesis for tumor vascularization in fibrotic livers
M Bartneck, PL Schrammen, D Möckel, O Govaere, A Liepelt, O Krenkel, ...
Cellular and molecular gastroenterology and hepatology 7 (2), 371-390, 2019
852019
Targeting distinct myeloid cell populations in vivo using polymers, liposomes and microbubbles
C Ergen, F Heymann, F Gremse, M Bartneck, U Panzer, R Pola, M Pechar, ...
Biomaterials 114, 106-120, 2017
752017
The scverse project provides a computational ecosystem for single-cell omics data analysis
I Virshup, D Bredikhin, L Heumos, G Palla, G Sturm, A Gayoso, I Kats, ...
Nature biotechnology 41 (5), 604-606, 2023
552023
Long term intravital multiphoton microscopy imaging of immune cells in healthy and diseased liver using CXCR6. Gfp reporter mice
F Heymann, PM Niemietz, J Peusquens, C Ergen, M Kohlhepp, ...
JoVE (Journal of Visualized Experiments), e52607, 2015
342015
Liver fibrosis affects the targeting properties of drug delivery systems to macrophage subsets in vivo
C Ergen, PM Niemietz, F Heymann, M Baues, F Gremse, R Pola, ...
Biomaterials 206, 49-60, 2019
242019
Single-cell multiomic analysis of thymocyte development reveals drivers of CD4+ T cell and CD8+ T cell lineage commitment
Z Steier, DA Aylard, LL McIntyre, I Baldwin, EJY Kim, LK Lutes, C Ergen, ...
Nature Immunology 24 (9), 1579-1590, 2023
92023
Targeting and Modulation of Liver Myeloid Immune Cells by Hard‐Shell Microbubbles
KT Warzecha, M Bartneck, D Möckel, L Appold, C Ergen, ...
Advanced biosystems 2 (5), 1800002, 2018
82018
Transjugular intrahepatic portosystemic shunt: a possible risk factor for direct‐acting antiviral treatment failure in patients with hepatitis C?
F Piecha, JM Gänßler, S Jordan, C Ergen, H Ittrich, J Kluwe, S Pischke, ...
Hepatology Communications 3 (5), 614-619, 2019
62019
Single-cell multi-omic analysis of thymocyte development reveals drivers of CD4/CD8 lineage commitment
Z Steier, DA Aylard, LL McIntyre, I Baldwin, EJ Yoon Kim, LK Lutes, ...
BioRxiv, 2021.07. 12.452119, 2021
42021
DISCERN: deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection
F Hausmann, C Ergen, R Khatri, M Marouf, S Hänzelmann, N Gagliani, ...
Genome Biology 24 (1), 212, 2023
22023
Consensus prediction of cell type labels with popV
C Ergen, G Xing, C Xu, M Jayasuriya, E McGeever, AO Pisco, AM Streets, ...
bioRxiv, 2023.08. 18.553912, 2023
22023
Dual CCR2/CCR5 Antagonist Cenicriviroc Leads to Potent and Significant Reduction in Proinflammatory CCR2+ Monocyte Infiltration in Experimental Acute Liver Injury
O Krenkel, T Puengel, JC Mossanen, C Ergen, F Heymann, E Lefebvre, ...
Hepatology 62, 1065A-1065A, 2015
22015
O033: CCR2+ infiltrating monocytes promote acetaminophen-induced acute liver injury–therapeutic implications of inhibiting CCR2 and CCL2
O Krenkel, JC Mossanen, C Ergen, F Heymann, E Lefebvre, D Eulberg, ...
Journal of Hepatology, S206, 2015
22015
Multimodal profiling reveals tissue-directed signatures of human immune cells altered with age
SB Wells, DB Rainbow, M Mark, PA Szabo, C Ergen, AR Maceiras, ...
bioRxiv, 2024.01. 03.573877, 2024
12024
Defining and benchmarking open problems in single-cell analysis
M Luecken, S Gigante, D Burkhardt, R Cannoodt, D Strobl, N Markov, ...
2024
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