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Ignacia Echeverria
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Integrative structure and functional anatomy of a nuclear pore complex
SJ Kim, J Fernandez-Martinez, I Nudelman, Y Shi, W Zhang, B Raveh, ...
Nature 555 (7697), 475-482, 2018
4772018
Structural insights into maize viviparous14, a key enzyme in the biosynthesis of the phytohormone abscisic acid
SAJ Messing, SB Gabelli, I Echeverria, JT Vogel, JC Guan, BC Tan, ...
The Plant Cell 22 (9), 2970-2980, 2010
2022010
Concerted dihedral rotations give rise to internal friction in unfolded proteins
I Echeverria, DE Makarov, GA Papoian
Journal of the American Chemical Society 136 (24), 8708-8713, 2014
1082014
Comprehensive Structure and Functional Adaptations of the Yeast Nuclear Pore Complex
C Akey, D Singh, C Ouch, I Echeverria, I Nudelman, JM Varberg, Z Yu, ...
942021
The acetylation landscape of the H4 histone tail: disentangling the interplay between the specific and cumulative effects
D Winogradoff, I Echeverria, DA Potoyan, GA Papoian
Journal of the American Chemical Society 137 (19), 6245-6253, 2015
742015
Structural dynamics of the human COP9 signalosome revealed by cross-linking mass spectrometry and integrative modeling
C Gutierrez, IE Chemmama, H Mao, C Yu, I Echeverria, SA Block, ...
Proceedings of the National Academy of Sciences 117 (8), 4088-4098, 2020
652020
Regulation of Rvb1/Rvb2 by a domain within the INO80 chromatin remodeling complex implicates the yeast Rvbs as protein assembly chaperones
CY Zhou, CI Stoddard, JB Johnston, MJ Trnka, I Echeverria, E Palovcak, ...
Cell reports 19 (10), 2033-2044, 2017
632017
Insights into HIV-1 proviral transcription from integrative structure and dynamics of the Tat: AFF4: P-TEFb: TAR complex
U Schulze-Gahmen, I Echeverria, G Stjepanovic, Y Bai, H Lu, ...
Elife 5, e15910, 2016
572016
Structural basis of CD4 downregulation by HIV-1 Nef
Y Kwon, RM Kaake, I Echeverria, M Suarez, MK Shamsabadi, ...
Nat Struct Mol Biol 27, 822–828, 2020
562020
Activation of PI3Kα by physiological effectors and by oncogenic mutations: structural and dynamic effects
SB Gabelli, I Echeverria, M Alexander, KC Duong-Ly, D Chaves-Moreira, ...
Biophysical reviews 6, 89-95, 2014
382014
Modeling biological complexes using integrative modeling platform
D Saltzberg, CH Greenberg, S Viswanath, I Chemmama, B Webb, ...
Biomolecular Simulations: Methods and Protocols, 353-377, 2019
342019
Oncogenic mutations weaken the interactions that stabilize the p110α‐p85α heterodimer in phosphatidylinositol 3‐kinase α
I Echeverria, Y Liu, SB Gabelli, LM Amzel
The FEBS journal 282 (18), 3528-3542, 2015
342015
Using Integrative Modeling Platform to compute, validate, and archive a model of a protein complex structure
DJ Saltzberg, S Viswanath, I Echeverria, IE Chemmama, B Webb, A Sali
Protein Science 30 (1), 250-261, 2021
322021
Helix propensities calculations for amino acids in alanine based peptides using Jarzynski's equality
I Echeverria, LM Amzel
Proteins: Structure, Function, and Bioinformatics 78 (5), 1302-1310, 2010
292010
SARS-CoV-2 variants evolve convergent strategies to remodel the host response
M Bouhaddou, AK Reuschl, BJ Polacco, LG Thorne, MR Ummadi, C Ye, ...
Cell 186 (21), 4597-4614. e26, 2023
28*2023
Na+ coordination at the Na2 site of the Na+/I− symporter
G Ferrandino, JP Nicola, YE Sánchez, I Echeverria, Y Liu, LM Amzel, ...
Proceedings of the National Academy of Sciences 113 (37), E5379-E5388, 2016
252016
Genetic interaction mapping informs integrative structure determination of protein complexes
H Braberg, I Echeverria, S Bohn, P Cimermancic, A Shiver, R Alexander, ...
Science 370 (6522), eaaz4910, 2020
242020
The structural basis for HIV-1 Vif antagonism of human APOBEC3G
YL Li, CA Langley, CM Azumaya, I Echeverria, NM Chesarino, ...
Nature 615 (7953), 728-733, 2023
222023
Disaccharide binding to galectin-1: free energy calculations and molecular recognition mechanism
I Echeverria, LM Amzel
Biophysical journal 100 (9), 2283-2292, 2011
222011
From systems to structure—using genetic data to model protein structures
H Braberg, I Echeverria, RM Kaake, A Sali, NJ Krogan
Nature Reviews Genetics 23 (6), 342-354, 2022
192022
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Articles 1–20