| Correlation patterns between DNA methylation and gene expression in the cancer genome atlas JCG Spainhour, HS Lim, SV Yi, P Qiu Cancer informatics 18, 1176935119828776, 2019 | 157 | 2019 |
| Immunotherapy via PD-L1–presenting biomaterials leads to long-term islet graft survival MM Coronel, KE Martin, MD Hunckler, G Barber, EB O’Neill, JD Medina, ... Science Advances 6 (35), eaba5573, 2020 | 61 | 2020 |
| Dual delivery of IL-10 and AT-RvD1 from PEG hydrogels polarize immune cells towards pro-regenerative phenotypes MCP Sok, N Baker, C McClain, HS Lim, T Turner, L Hymel, M Ogle, ... Biomaterials 268, 120475, 2021 | 36 | 2021 |
| Risk-associated alterations in marrow T cells in pediatric leukemia JK Bailur, SS McCachren, K Pendleton, JC Vasquez, HS Lim, A Duffy, ... JCI insight 5 (16), 2020 | 24 | 2020 |
| Analyzing immune response to engineered hydrogels by hierarchical clustering of inflammatory cell subsets MA Fernandez-Yague, LA Hymel, CE Olingy, C McClain, ME Ogle, ... Science Advances 8 (8), eabd8056, 2022 | 19 | 2022 |
| Quantification and tracking of genetically engineered dendritic cells for studying immunotherapy A Bar‐Shir, L Alon, MJ Korrer, HS Lim, NN Yadav, Y Kato, AP Pathak, ... Magnetic resonance in medicine 79 (2), 1010-1019, 2018 | 18 | 2018 |
| Modulating local S1P receptor signaling as a regenerative immunotherapy after volumetric muscle loss injury LA Hymel, ME Ogle, SE Anderson, CL San Emeterio, TC Turner, WY York, ... Journal of Biomedical Materials Research Part A 109 (5), 695-712, 2021 | 15 | 2021 |
| Harnessing lipid signaling pathways to target specialized pro-angiogenic neutrophil subsets for regenerative immunotherapy TC Turner, MCP Sok, LA Hymel, FS Pittman, WY York, QD Mac, ... Science Advances 6 (44), eaba7702, 2020 | 15 | 2020 |
| Synthetic chromosome fusion: Effects on mitotic and meiotic genome structure and function J Luo, LA Vale-Silva, AR Raghavan, G Mercy, J Heldrich, X Sun, MK Li, ... Cell Genomics 3 (11), 2023 | 14 | 2023 |
| Manipulating the 3D organization of the largest synthetic yeast chromosome W Zhang, L Lazar-Stefanita, H Yamashita, MJ Shen, LA Mitchell, ... Molecular Cell 83 (23), 4424-4437. e5, 2023 | 11 | 2023 |
| An mHealth App (Speech Banana) for auditory training: app design and development study JT Ratnanather, R Bhattacharya, MB Heston, J Song, LR Fernandez, ... JMIR mHealth and uHealth 9 (3), e20890, 2021 | 9 | 2021 |
| Macrophage PD-1 associates with neutrophilia and reduced bacterial killing in early cystic fibrosis airway disease C Margaroli, H Horati, LW Garratt, VD Giacalone, C Schofield, AS Dittrich, ... Journal of Cystic Fibrosis 21 (6), 967-976, 2022 | 6 | 2022 |
| Nanofiber-based delivery of bioactive lipids promotes pro-regenerative inflammation and enhances muscle fiber growth after volumetric muscle loss CL San Emeterio, LA Hymel, TC Turner, ME Ogle, EG Pendleton, ... Frontiers in Bioengineering and Biotechnology 9, 650289, 2021 | 6 | 2021 |
| Quantifying cell-type-specific differences of single-cell datasets using uniform manifold approximation and projection for dimension reduction and shapley additive exPlanations HS Lim, P Qiu Journal of Computational Biology 30 (7), 738-750, 2023 | 5 | 2023 |
| Applying interpretable machine learning workflow to evaluate exposure–response relationships for large‐molecule oncology drugs G Liu, J Lu, HS Lim, JY Jin, D Lu CPT: pharmacometrics & systems pharmacology 11 (12), 1614-1627, 2022 | 4 | 2022 |
| Identifying dysregulated immune cell subsets following volumetric muscle loss with pseudo-time trajectories LA Hymel, SE Anderson, TC Turner, WY York, H Zhang, AR Liversage, ... Communications Biology 6 (1), 749, 2023 | 3 | 2023 |
| JSOM: Jointly-evolving self-organizing maps for alignment of biological datasets and identification of related clusters HS Lim, P Qiu PLoS Computational Biology 17 (3), e1008804, 2021 | 3 | 2021 |
| Embracing enzyme promiscuity with activity-based compressed biosensing BA Holt, HS Lim, A Sivakumar, H Phuengkham, M Su, MK Tuttle, Y Xu, ... Cell Reports Methods 3 (1), 2023 | 2 | 2023 |
| Quantifying the clusterness and trajectoriness of single-cell RNA-seq data HS Lim, P Qiu PLOS Computational Biology 20 (2), e1011866, 2024 | | 2024 |
| Stromal STAT5-mediated trophic activity regulates hematopoietic niche factors Z Wang, G Emmel, HS Lim, W Zhu, A Kosters, EEB Ghosn, P Qiu, ... Stem Cells 41 (10), 944-957, 2023 | | 2023 |
