| A naturally inspired antibiotic to target multidrug-resistant pathogens Z Wang, B Koirala, Y Hernandez, M Zimmerman, S Park, DS Perlin, ... Nature 601 (7894), 606-611, 2022 | 120 | 2022 |
| Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation EF Mongodin, SR Casjens, JF Bruno, Y Xu, EF Drabek, DR Riley, ... BMC genomics 14, 1-25, 2013 | 89 | 2013 |
| Pervasive Recombination and Sympatric Genome Diversification Driven by Frequency-Dependent Selection in Borrelia burgdorferi, the Lyme Disease Bacterium J Haven, LC Vargas, EF Mongodin, V Xue, Y Hernandez, P Pagan, ... Genetics 189 (3), 951-966, 2011 | 79 | 2011 |
| Bioinformatic prospecting and synthesis of a bifunctional lipopeptide antibiotic that evades resistance Z Wang, B Koirala, Y Hernandez, M Zimmerman, SF Brady Science 376 (6596), 991-996, 2022 | 52 | 2022 |
| Fast, adaptive evolution at a bacterial host-resistance locus: the PFam54 gene array in Borrelia burgdorferi E Wywial, J Haven, SR Casjens, YA Hernandez, S Singh, EF Mongodin, ... Gene 445 (1-2), 26-37, 2009 | 51 | 2009 |
| VNTRseek—a computational tool to detect tandem repeat variants in high-throughput sequencing data Y Gelfand, Y Hernandez, J Loving, G Benson Nucleic acids research 42 (14), 8884-8894, 2014 | 37 | 2014 |
| BitPAl: a bit-parallel, general integer-scoring sequence alignment algorithm J Loving, Y Hernandez, G Benson Bioinformatics 30 (22), 3166-3173, 2014 | 34 | 2014 |
| Identification of structurally diverse menaquinone-binding antibiotics with in vivo activity against multidrug-resistant pathogens L Li, B Koirala, Y Hernandez, LW MacIntyre, MA Ternei, R Russo, ... Nature microbiology 7 (1), 120-131, 2022 | 28 | 2022 |
| Genome-wide characterization of human minisatellite VNTRs: population-specific alleles and gene expression differences M Eslami Rasekh, Y Hernández, SD Drinan, JI Fuxman Bass, G Benson Nucleic acids research 49 (8), 4308-4324, 2021 | 22 | 2021 |
| Biosynthetic Interrogation of Soil Metagenomes Reveals Metamarin, an Uncommon Cyclomarin Congener with Activity against Mycobacterium tuberculosis L Li, LW MacIntyre, T Ali, R Russo, B Koirala, Y Hernandez, SF Brady Journal of natural products 84 (4), 1056-1066, 2021 | 21 | 2021 |
| BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines Y Hernández, R Bernstein, P Pagan, L Vargas, W McCaig, G Ramrattan, ... BMC bioinformatics 19, 1-7, 2018 | 17 | 2018 |
| A bit-parallel, general integer-scoring sequence alignment algorithm G Benson, Y Hernandez, J Loving Combinatorial Pattern Matching: 24th Annual Symposium, CPM 2013, Bad …, 2013 | 17 | 2013 |
| Lapcin, a potent dual topoisomerase I/II inhibitor discovered by soil metagenome guided total chemical synthesis Z Wang, N Forelli, Y Hernandez, M Ternei, SF Brady Nature Communications 13 (1), 842, 2022 | 10 | 2022 |
| Linkage disequilibrium based genotype calling from low-coverage shotgun sequencing reads J Duitama, J Kennedy, S Dinakar, Y Hernández, Y Wu, II Măndoiu BMC bioinformatics 12, 1-11, 2011 | 10 | 2011 |
| High-throughput retrieval of target sequences from complex clone libraries using CRISPRi J Burian, VK Libis, YA Hernandez, L Guerrero-Porras, MA Ternei, ... Nature Biotechnology 41 (5), 626-630, 2023 | 8 | 2023 |
| Sleep-wake disorders in Alzheimer’s disease: further genetic analyses in relation to objective sleep measures JA Yesavage, A Noda, A Heath, MW McNerney, BW Domingue, ... International Psychogeriatrics, 1-7, 2019 | 6 | 2019 |
| Discovery of Paenibacillaceae family Gram-negative-active cationic lipopeptide antibiotics using evolution-guided chemical synthesis Z Wang, B Koirala, Y Hernandez, SF Brady Organic letters 24 (27), 4943-4948, 2022 | 5 | 2022 |
| A study of the variability of minisatellite tandem repeat loci in the human genome based on high-throughput sequencing data Y Hernandez Boston University, 2019 | 1 | 2019 |
| Tapcin, an In Vivo Active Dual Topoisomerase I/II Inhibitor Discovered by Synthetic Bioinformatic Natural Product (Syn‐BNP)‐Coupled Metagenomics Z Wang, A Kasper, M Takahashi, A Morales Amador, A Bhattacharjee, ... Angewandte Chemie International Edition 63 (17), e202317187, 2024 | | 2024 |
| Tapcin, an In Vivo Active Dual Topoisomerase I/II Inhibitor Discovered by Synthetic Bioinformatic Natural Product (Syn-BNP)-Coupled Metagenomics Z Wang, A Kasper, M Takahashi, A Morales Amador, A Bhattacharjee, ... ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2024 | | 2024 |
Weigang Qiu (邱伟刚)Professor, Dept. Biological Sciences, Hunter College of City University of New YorkVerified email at genectr.hunter.cuny.edu
