| Identification of cis Elements Directing Termination of Yeast Nonpolyadenylated snoRNA Transcripts KL Carroll, DA Pradhan, JA Granek, ND Clarke, JL Corden Molecular and cellular biology 24 (14), 6241-6252, 2004 | 189 | 2004 |
| Outcrossing, mitotic recombination, and life-history trade-offs shape genome evolution in Saccharomyces cerevisiae PM Magwene, Ö Kayıkçı, JA Granek, JM Reininga, Z Scholl, D Murray Proceedings of the National Academy of Sciences 108 (5), 1987-1992, 2011 | 170 | 2011 |
| Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection X Liu, CK Lee, JA Granek, ND Clarke, JD Lieb Genome research 16 (12), 1517-1528, 2006 | 170 | 2006 |
| Environmental and genetic determinants of colony morphology in yeast JA Granek, PM Magwene PLoS genetics 6 (1), e1000823, 2010 | 169 | 2010 |
| Antifungal drug resistance evoked via RNAi-dependent epimutations S Calo, C Shertz-Wall, SC Lee, RJ Bastidas, FE Nicolás, JA Granek, ... Nature 513 (7519), 555-558, 2014 | 153 | 2014 |
| Explicit equilibrium modeling of transcription-factor binding and gene regulation JA Granek, ND Clarke Genome biology 6, 1-10, 2005 | 145 | 2005 |
| The C-Terminal domain of the Adenine-DNA glycosylase MutY confers specificity for 8-Oxoguanine⊙ adenine mispairs and may have evolved from MutT, an 8-Oxo-dGTPase DM Noll, A Gogos, JA Granek, ND Clarke Biochemistry 38 (20), 6374-6379, 1999 | 144 | 1999 |
| Integrating chemical mutagenesis and whole-genome sequencing as a platform for forward and reverse genetic analysis of Chlamydia M Kokes, JD Dunn, JA Granek, BD Nguyen, JR Barker, RH Valdivia, ... Cell host & microbe 17 (5), 716-725, 2015 | 140 | 2015 |
| Elucidation of the calcineurin-Crz1 stress response transcriptional network in the human fungal pathogen Cryptococcus neoformans EWL Chow, SA Clancey, RB Billmyre, AF Averette, JA Granek, ... PLoS genetics 13 (4), e1006667, 2017 | 104 | 2017 |
| Fungal genome and mating system transitions facilitated by chromosomal translocations involving intercentromeric recombination S Sun, V Yadav, RB Billmyre, CA Cuomo, M Nowrousian, L Wang, ... PLoS biology 15 (8), e2002527, 2017 | 66 | 2017 |
| Expression of the vaccinia virus A2. 5L redox protein is required for virion morphogenesis TG Senkevich, CL White, A Weisberg, JA Granek, EJ Wolffe, EV Koonin, ... Virology 300 (2), 296-303, 2002 | 49 | 2002 |
| Pleiotropic signaling pathways orchestrate yeast development JA Granek, Ö Kayıkçı, PM Magwene Current opinion in microbiology 14 (6), 676-681, 2011 | 42 | 2011 |
| Rank order metrics for quantifying the association of sequence features with gene regulation ND Clarke, JA Granek Bioinformatics 19 (2), 212-218, 2003 | 41 | 2003 |
| The Genetic Architecture of Biofilm Formation in a Clinical Isolate of Saccharomyces cerevisiae JA Granek, D Murray, Ö Kayrkçi, PM Magwene Genetics 193 (2), 587-600, 2013 | 38 | 2013 |
| Rapid mapping of insertional mutations to probe cell wall regulation in Cryptococcus neoformans SK Esher, JA Granek, JA Alspaugh Fungal Genetics and Biology 82, 9-21, 2015 | 26 | 2015 |
| The Pediatric Obesity Microbiome and Metabolism Study (POMMS): methods, baseline data, and early insights JR McCann, NA Bihlmeyer, K Roche, C Catherine, J Jawahar, LC Kwee, ... Obesity 29 (3), 569-578, 2021 | 23 | 2021 |
| A comparative study of gut microbiomes in captive nocturnal strepsirrhines SL Bornbusch, LK Greene, EA McKenney, SJ Volkoff, FS Midani, ... American Journal of Primatology 81 (10-11), e22986, 2019 | 18 | 2019 |
| Nasal immunization with small molecule mast cell activators enhance immunity to co-administered subunit immunogens BT Johnson-Weaver, HW Choi, H Yang, JA Granek, C Chan, SN Abraham, ... Frontiers in immunology 12, 730346, 2021 | 10 | 2021 |
| Leveraging patient derived models of FGFR2 fusion positive intrahepatic cholangiocarcinoma to identify synergistic therapies ME Lidsky, Z Wang, M Lu, A Liu, SD Hsu, SJ McCall, Z Sheng, JA Granek, ... NPJ Precision Oncology 6 (1), 75, 2022 | 9 | 2022 |
| The effect of levofloxacin on the lung microbiota of laboratory rats SMB Finn, U Scheuermann, ZE Holzknecht, Q Gao, MM Ibrahim, W Parker, ... Experimental Lung Research 45 (7), 200-208, 2019 | 6 | 2019 |
