| Exploring complex cellular phenotypes and model-guided strain design with a novel genome-scale metabolic model of Clostridium thermocellum DSM 1313 … RA Thompson, S Dahal, S Garcia, I Nookaew, CT Trinh Biotechnology for biofuels 9, 1-20, 2016 | 39 | 2016 |
| Synthesizing systems biology knowledge from omics using genome‐scale models S Dahal, JT Yurkovich, H Xu, BO Palsson, L Yang Proteomics 20 (17-18), 1900282, 2020 | 30 | 2020 |
| Genome-scale modeling of metabolism and macromolecular expression and their applications S Dahal, J Zhao, L Yang Biotechnology and Bioprocess Engineering 25, 931-943, 2020 | 11 | 2020 |
| Genome-scale modeling of thermophilic microorganisms S Dahal, S Poudel, RA Thompson Network Biology, 103-119, 2017 | 9 | 2017 |
| Genome-scale model of Pseudomonas aeruginosa metabolism unveils virulence and drug potentiation S Dahal, A Renz, A Dräger, L Yang Communications Biology 6 (1), 165, 2023 | 6 | 2023 |
| Novel context-specific genome-scale modelling explores the potential of triacylglycerol production by Chlamydomonas reinhardtii H Yao, S Dahal, L Yang Microbial Cell Factories 22 (1), 13, 2023 | 6 | 2023 |
| Recent advances in genome-scale modeling of proteome allocation S Dahal, J Zhao, L Yang Current Opinion in Systems Biology 26, 39-45, 2021 | 4 | 2021 |
| Unification of cell-scale metabolic activity with biofilm behavior by integration of advanced flow and reactive-transport modeling and microfluidic experiments J Zhao, M Zarabadi, D Hall, S Dahal, J Greener, L Yang bioRxiv, 2024.01. 25.577134, 2024 | 2 | 2024 |
| Mechanism for Utilization of the Populus-Derived Metabolite Salicin by a Pseudomonas—Rahnella Co-Culture S Dahal, GB Hurst, K Chourey, NL Engle, LH Burdick, JL Morrell-Falvey, ... Metabolites 13 (2), 140, 2023 | 2 | 2023 |
| L-norepinephrine induces ROS formation but alters microbial community composition by altering cellular metabolism A Bains, S Dahal, B Manna, M Lyte, EP Kolodziej, FWR Chaplen, L Yang, ... bioRxiv, 2022.06. 28.482069, 2022 | 1 | 2022 |
| Genome-scale modeling of Pseudomonas aeruginosa PA14 unveils its broad metabolic capabilities and role of metabolism in drug potentiation S Dahal, A Renz, A Dräger, L Yang bioRxiv, 2021.04. 15.439930, 2021 | 1 | 2021 |
| Novel Context-Specific Genome-Scale Modelling Explores the Potential of Chlamydomonas reinhardtii for Synthetic Biology Applications H Yao, S Dahal, L Yang bioRxiv, 2022.10. 07.511370, 2022 | | 2022 |
| Characterization of Diverse Mechanisms of Salicin Degradation in Populus Microbiome Isolates S Dahal | | 2019 |
