| In vivo antiviral host transcriptional response to SARS-CoV-2 by viral load, sex, and age NAP Lieberman, V Peddu, H Xie, L Shrestha, ML Huang, MC Mears, ... PLoS biology 18 (9), e3000849, 2020 | 254 | 2020 |
| Inhibition of Coronavirus Entry In Vitro and Ex Vivo by a Lipid-Conjugated Peptide Derived from the SARS-CoV-2 Spike Glycoprotein HRC Domain VK Outlaw, FT Bovier, MC Mears, MN Cajimat, Y Zhu, MJ Lin, A Addetia, ... MBio 11 (5), 10.1128/mbio. 01935-20, 2020 | 69 | 2020 |
| Metagenomic analysis reveals clinical SARS-CoV-2 infection and bacterial or viral superinfection and colonization V Peddu, RC Shean, H Xie, L Shrestha, GA Perchetti, SS Minot, ... Clinical chemistry 66 (7), 966-972, 2020 | 65 | 2020 |
| Sensitive recovery of complete SARS-CoV-2 genomes from clinical samples by use of Swift Biosciences’ SARS-CoV-2 multiplex amplicon sequencing panel A Addetia, MJ Lin, V Peddu, P Roychoudhury, KR Jerome, AL Greninger Journal of clinical microbiology 59 (1), 10.1128/jcm. 02226-20, 2020 | 52 | 2020 |
| Stability of SARS-CoV-2 in phosphate-buffered saline for molecular detection GA Perchetti, ML Huang, V Peddu, KR Jerome, AL Greninger Journal of Clinical Microbiology 58 (8), 10.1128/jcm. 01094-20, 2020 | 46 | 2020 |
| Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6 AL Greninger, GM Knudsen, P Roychoudhury, DJ Hanson, RH Sedlak, ... BMC genomics 19 (1), 1-17, 2018 | 45 | 2018 |
| Inherited Chromosomally Integrated Human Herpesvirus 6 Demonstrates Tissue-Specific RNA Expression In Vivo That Correlates with an Increased Antibody … V Peddu, I Dubuc, A Gravel, H Xie, ML Huang, D Tenenbaum, KR Jerome, ... Journal of virology 94 (1), 10.1128/jvi. 01418-19, 2019 | 31 | 2019 |
| Molecular features of the measles virus viral fusion complex that favor infection and spread in the brain C Mathieu, FT Bovier, M Ferren, NAP Lieberman, C Predella, A Lalande, ... MBio 12 (3), 10.1128/mbio. 00799-21, 2021 | 23 | 2021 |
| Cell free DNA from respiratory pathogens is detectable in the blood plasma of cystic fibrosis patients SLR Barrett, EA Holmes, DR Long, RC Shean, GE Bautista, ... Scientific reports 10 (1), 6903, 2020 | 23 | 2020 |
| RNA Sequencing of the In Vivo Human Herpesvirus 6B Transcriptome To Identify Targets for Clinical Assays Distinguishing between Latent and Active Infections JA Hill, M Ikoma, DM Zerr, RS Basom, V Peddu, ML Huang, R Hall Sedlak, ... Journal of Virology 93 (3), 10.1128/jvi. 01419-18, 2019 | 16 | 2019 |
| NCBI’s virus discovery Hackathon: Engaging research communities to identify cloud infrastructure requirements R Connor, R Brister, JP Buchmann, W Deboutte, R Edwards, ... Genes 10 (9), 714, 2019 | 13 | 2019 |
| Sensitive identification of bacterial DNA in clinical specimens by broad-range 16S rRNA gene enrichment S Rassoulian Barrett, NG Hoffman, C Rosenthal, A Bryan, DA Marshall, ... Journal of Clinical Microbiology 58 (12), 10.1128/jcm. 01605-20, 2020 | 12 | 2020 |
| High-resolution profiling of human cytomegalovirus cell-free DNA in human plasma highlights its exceptionally fragmented nature V Peddu, BT Bradley, AM Casto, R Shree, BG Colbert, H Xie, TK Santo, ... Scientific Reports 10 (1), 3734, 2020 | 9 | 2020 |
| Mutant KRAS regulates transposable element RNA and innate immunity via KRAB zinc-finger genes RE Reggiardo, SV Maroli, H Halasz, M Ozen, E Hrabeta-Robinson, ... Cell reports 40 (3), 2022 | 6 | 2022 |
| Profiling of repetitive RNA sequences in the blood plasma of patients with cancer RE Reggiardo, SV Maroli, V Peddu, AE Davidson, A Hill, E LaMontagne, ... Nature Biomedical Engineering, 1-9, 2023 | 5 | 2023 |
| Host–pathogen dynamics in longitudinal clinical specimens from patients with COVID-19 MJ Lin, VM Rachleff, H Xie, L Shrestha, NAP Lieberman, V Peddu, ... Scientific Reports 12 (1), 5856, 2022 | 5 | 2022 |
| Genomic and proteomic analysis of Human herpesvirus 6 reveals distinct clustering of acute versus inherited forms and reannotation of reference strain AL Greninger, GM Knudsen, P Roychoudhury, DJ Hanson, RH Sedlak, ... bioRxiv, 181248, 2017 | 3 | 2017 |
| In vivo antiviral host response to SARS-CoV-2 by viral load, sex, and age (preprint) NAP Lieberman, V Peddu, H Xie, L Shrestha, M Huang, MC Mears, ... | 2 | 2020 |
| Sensitive detection of highly fragmented cytomegalovirus nucleic acid in human cfDNA V Peddu, BT Bradley, RS Shree, BG Colbert, H Xie, TK Santo, ML Huang, ... bioRxiv, 748434, 2019 | 2 | 2019 |
| Consensus machine learning for gene target selection in pediatric AML risk J Smith, SK Maden, D Lee, R Buie, V Peddu, R Shean, B Busby bioRxiv, 632166, 2019 | 2 | 2019 |
