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Dunja Skoko
Dunja Skoko
Single molecule biophysics, Super-resolution microscopy
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Year
Probing protein heterogeneity in the plasma membrane using PALM and pair correlation analysis
P Sengupta, T Jovanovic-Talisman, D Skoko, M Renz, SL Veatch, ...
Nature methods 8 (11), 969-975, 2011
6032011
Near-field-magnetic-tweezer manipulation of single DNA molecules
J Yan, D Skoko, JF Marko
Physical Review E 70 (1), 011905, 2004
2312004
Mechanism of chromosome compaction and looping by the Escherichia coli nucleoid protein Fis
D Skoko, D Yoo, H Bai, B Schnurr, J Yan, SM McLeod, JF Marko, ...
Journal of molecular biology 364 (4), 777-798, 2006
1712006
Micromechanical analysis of the binding of DNA-bending proteins HMGB1, NHP6A, and HU reveals their ability to form highly stable DNA− protein complexes
D Skoko, B Wong, RC Johnson, JF Marko
Biochemistry 43 (43), 13867-13874, 2004
1682004
Defining a centromere-like element in Bacillus subtilis by identifying the binding sites for the chromosome-anchoring protein RacA
S Ben-Yehuda, M Fujita, XS Liu, B Gorbatyuk, D Skoko, J Yan, JF Marko, ...
Molecular cell 17 (6), 773-782, 2005
1302005
Barrier-to-autointegration factor (BAF) condenses DNA by looping
D Skoko, M Li, Y Huang, M Mizuuchi, M Cai, CM Bradley, PJ Pease, ...
Proceedings of the National Academy of Sciences 106 (39), 16610-16615, 2009
882009
Micromanipulation Studies of Chromatin Fibers in Xenopus Egg Extracts Reveal ATP-dependent Chromatin Assembly Dynamics
J Yan, TJ Maresca, D Skoko, CD Adams, B Xiao, MO Christensen, ...
Molecular biology of the cell 18 (2), 464-474, 2007
842007
Low-force DNA condensation and discontinuous high-force decondensation reveal a loop-stabilizing function of the protein Fis
D Skoko, J Yan, RC Johnson, JF Marko
Physical review letters 95 (20), 208101, 2005
782005
Compact Cell Imaging Device (CoCID) provides insights into the cellular origins of viral infections
K Fahy, V Weinhardt, M Vihinen-Ranta, N Fletcher, D Skoko, E Pereiro, ...
JPhys Photonics 3 (3), 2021
212021
Tn5 transposase loops DNA in the absence of Tn5 transposon end sequences
CD Adams, B Schnurr, D Skoko, JF Marko, WS Reznikoff
Molecular microbiology 62 (6), 1558-1568, 2006
132006
Development of a commercial laboratory scale soft x-ray microscope
T McEnroe, F O’Reilly, P Sheridan, J Howard, R Byrne, D Rogers, ...
Microscopy and Microanalysis 23 (S1), 982-983, 2017
32017
Development of a commercial laboratory scale soft x-ray microscope
K Fahy, T McEnroe, F O'Reilly, W Fyans, D Skoko, P Sheridan
Microscopy and Microanalysis 26 (S2), 3008-3009, 2020
22020
Irreversible binding of the dna-bending proteins hmgb1, nhp6a and huto a large dna molecule
D Skoko, B Wong, R Johnson, JF Marko
Biophysical Journal 86 (1), 7A-7A, 2004
22004
Cryo Soft X-ray Microscopy for Whole Cell Imaging-Progress in the Development of a Commercial Laboratory Scale Device
K Fahy, T McEnroe, D Skoko, W Fyans, F O'Reilly, P Sheridan
Microscopy and Microanalysis 27 (S1), 3238-3239, 2021
2021
Developments Towards Correlative Cryo-Light 3D Soft X-Ray Tomography
D Skoko, K Fahy, P Sheridan, T McEnroe
Microscopy and Microanalysis 26 (S2), 3156-3157, 2020
2020
Quantitative Analysis of the Lateral Organization of Plasma Membrane Proteins using Photoactivated Localization Microscopy (PALM)
T Jovanovic-Talisman, P Sengupta, D Skoko, J Lippincott-Schwartz
Biophysical Journal 100 (3), 476a, 2011
2011
Micromanipulation studies of chromatin fibers in Xenopus egg extracts reveal ATP-dependent nucleosome assembly dynamics
TJ Maresca, J Yan, D Skoko, R Heald, JF Marko
Molecular Biology of the Cell 18, 464-474, 2007
2007
Single-molecule micromanipulation study of DNA-organizing proteins
D Skoko
University of Illinois at Chicago, 2006
2006
Observing dynamics of chromatin fibers in Xenopus egg extracts by single DNA manipulation using a transverse magnetic tweezer setup
J Yan, D Skoko, J Marko, T Maresca, R Heald
APS March Meeting Abstracts, A21. 007, 2005
2005
Soft Matter, Biological, and Interdisciplinary Physics-Low-Force DNA, Condensation and Discontinuous High-Force Decondensation Reveal a Loop-Stabilizing Function of the Protein Fis
D Skoko, J Yan, RC Johnson, JF Marko
Physical Review Letters 95 (20), 208101-208101, 2005
2005
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