| The molecular taxonomy of primary prostate cancer A Abeshouse, J Ahn, R Akbani, A Ally, S Amin, CD Andry, M Annala, ... Cell 163 (4), 1011-1025, 2015 | 2577 | 2015 |
| Comprehensive and integrative genomic characterization of hepatocellular carcinoma A Ally, M Balasundaram, R Carlsen, E Chuah, A Clarke, N Dhalla, RA Holt, ... Cell 169 (7), 1327-1341. e23, 2017 | 1835 | 2017 |
| A large-scale evaluation of computational protein function prediction P Radivojac, WT Clark, TR Oron, AM Schnoes, T Wittkop, A Sokolov, ... Nature methods 10 (3), 221-227, 2013 | 1034 | 2013 |
| Comprehensive molecular characterization of pheochromocytoma and paraganglioma L Fishbein, I Leshchiner, V Walter, L Danilova, AG Robertson, ... Cancer cell 31 (2), 181-193, 2017 | 623 | 2017 |
| Integrative molecular characterization of malignant pleural mesothelioma J Hmeljak, F Sanchez-Vega, KA Hoadley, J Shih, C Stewart, D Heiman, ... Cancer discovery 8 (12), 1548-1565, 2018 | 485 | 2018 |
| Inferring causal molecular networks: empirical assessment through a community-based effort SM Hill, LM Heiser, T Cokelaer, M Unger, NK Nesser, DE Carlin, Y Zhang, ... Nature methods 13 (4), 310-318, 2016 | 237 | 2016 |
| A basal stem cell signature identifies aggressive prostate cancer phenotypes BA Smith, A Sokolov, V Uzunangelov, R Baertsch, Y Newton, K Graim, ... Proceedings of the National Academy of Sciences 112 (47), E6544-E6552, 2015 | 219 | 2015 |
| TumorMap: exploring the molecular similarities of cancer samples in an interactive portal Y Newton, AM Novak, T Swatloski, DC McColl, S Chopra, K Graim, ... Cancer research 77 (21), e111-e114, 2017 | 77 | 2017 |
| Combining heterogeneous data sources for accurate functional annotation of proteins A Sokolov, C Funk, K Graim, K Verspoor, A Ben-Hur BMC bioinformatics 14, 1-13, 2013 | 68 | 2013 |
| Genomic evidence of widespread admixture from polar bears into brown bears during the last ice age JA Cahill, PD Heintzman, K Harris, MD Teasdale, J Kapp, AER Soares, ... Molecular Biology and Evolution 35 (5), 1120-1129, 2018 | 62 | 2018 |
| A community challenge for inferring genetic predictors of gene essentialities through analysis of a functional screen of cancer cell lines M Gönen, BA Weir, GS Cowley, F Vazquez, Y Guan, A Jaiswal, ... Cell systems 5 (5), 485-497. e3, 2017 | 24 | 2017 |
| PLATYPUS: A multiple—view learning predictive framework for cancer drug sensitivity prediction K Graim, V Friedl, KE Houlahan, JM Stuart Biocomputing 2019: Proceedings of the pacific symposium, 136-147, 2018 | 17 | 2018 |
| Modeling molecular development of breast cancer in canine mammary tumors K Graim, D Gorenshteyn, DG Robinson, NJ Carriero, JA Cahill, ... Genome Research 31 (2), 337-347, 2021 | 15 | 2021 |
| Towards artificial intelligence-enabled extracellular vesicle precision drug delivery ZF Greenberg, KS Graim, M He Advanced Drug Delivery Reviews, 114974, 2023 | 11 | 2023 |
| Prophetic Granger Causality to infer gene regulatory networks DE Carlin, EO Paull, K Graim, CK Wong, A Bivol, P Ryabinin, K Ellrott, ... PloS one 12 (12), e0170340, 2017 | 11 | 2017 |
| Revealing cancer subtypes with higher-order correlations applied to imaging and omics data K Graim, TT Liu, AS Achrol, EO Paull, Y Newton, SD Chang, GR Harsh, ... BMC medical genomics 10, 1-14, 2017 | 10 | 2017 |
| Drivers of genomic loss of heterozygosity in leiomyosarcoma are distinct from carcinomas ND Seligson, J Tang, DX Jin, MP Bennett, JA Elvin, K Graim, JL Hays, ... NPJ Precision Oncology 6 (1), 29, 2022 | 6 | 2022 |
| Contributions from the 2019 literature on bioinformatics and translational informatics M Smaïl-Tabbone, B Rance Yearbook of Medical Informatics 29 (01), 188-192, 2020 | 4 | 2020 |
| DHCR7 Expression Predicts Poor Outcomes and Mortality From Sepsis FW Guirgis, V Jacob, D Wu, M Henson, K Daly-Crews, C Hopson, ... Critical Care Explorations 5 (6), 2023 | 2 | 2023 |
| Early differentiation between sepsis and sterile inflammation via urinary gene signatures of metabolic dysregulation S Bandyopadhyay, TJ Loftus, YC Peng, MC Lopez, HV Baker, MS Segal, ... Shock 58 (1), 20-27, 2022 | 2 | 2022 |
Joshua M StuartUC Santa Cruz Genomics InstituteVerified email at ucsc.edu
