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Aleksander Jankowski
Aleksander Jankowski
Assistant Professor, University of Warsaw
Verified email at uw.edu.pl - Homepage
Title
Cited by
Cited by
Year
Boruta – A System for Feature Selection
MB Kursa, A Jankowski, WR Rudnicki
Fundamenta Informaticae 101 (4), 271-285, 2010
6422010
Highly rearranged chromosomes reveal uncoupling between genome topology and gene expression
Y Ghavi-Helm, A Jankowski, S Meiers, RR Viales, JO Korbel, ...
Nature genetics 51 (8), 1272-1282, 2019
3092019
SOXE transcription factors form selective dimers on non-compact DNA motifs through multifaceted interactions between dimerization and high-mobility group domains
YH Huang, A Jankowski, KSE Cheah, S Prabhakar, R Jauch
Scientific Reports 5, 10398, 2015
852015
Comprehensive prediction in 78 human cell lines reveals rigidity and compactness of transcription factor dimers
A Jankowski, E Szczurek, R Jauch, J Tiuryn, S Prabhakar
Genome Research 23 (8), 1307-1318, 2013
392013
TACO: a general-purpose tool for predicting cell-type-specific transcription factor dimers
A Jankowski, S Prabhakar, J Tiuryn
BMC Genomics 15 (1), 208, 2014
342014
The new SIMD implementation of the Smith-Waterman algorithm on Cell microprocessor
WR Rudnicki, A Jankowski, A Modzelewski, A Piotrowski, A Zadrożny
Fundamenta Informaticae 96 (1-2), 181-194, 2009
202009
DNA-mediated dimerization on a compact sequence signature controls enhancer engagement and regulation by FOXA1
X Wang, Y Srivastava, A Jankowski, V Malik, Y Wei, RCH del Rosario, ...
Nucleic Acids Research 46 (11), 5470-5486, 2018
172018
Romulus: robust multi-state identification of transcription factor binding sites from DNase-seq data
A Jankowski, J Tiuryn, S Prabhakar
Bioinformatics 32 (16), 2419-2426, 2016
172016
Chromosome-level organization of the regulatory genome in the Drosophila nervous system
G Mohana, J Dorier, X Li, M Mouginot, RC Smith, H Malek, M Leleu, ...
Cell 186 (18), 3826-3844. e26, 2023
102023
Enhanceosome transcription factors preferentially dimerize with high mobility group proteins
A Jankowski, P Obara, U Mathur, J Tiuryn
BMC Systems Biology 10 (1), 14, 2016
42016
New enhancer-promoter interactions are gained during tissue differentiation and reflect changes in E/P activity
T Pollex, A Rabinowitz, MC Gambetta, R Marco-Ferreres, RR Viales, ...
BioRxiv, 2022.12. 07.519443, 2022
32022
Chromatin gene-gene loops support the cross-regulation of genes with related function
T Pollex, R Marco-Ferreres, L Ciglar, Y Ghavi-Helm, A Rabinowitz, ...
Molecular Cell, 2023
22023
Enhancer–promoter interactions become more instructive in the transition from cell-fate specification to tissue differentiation
T Pollex, A Rabinowitz, MC Gambetta, R Marco-Ferreres, RR Viales, ...
Nature Genetics, 1-11, 2024
12024
The pZRS non-coding regulatory mutation resulting in triphalangeal thumb–polysyndactyly syndrome changes the pattern of local interactions
JWP Potuijt, A Sowinska-Seidler, E Bukowska-Olech, P Nguyen, ...
Molecular Genetics and Genomics 297 (5), 1343-1352, 2022
12022
BETWEEN YOUNG AND OLD BRAIN: HETEROGENEITY AND MORPHOLOGY OF MICROGLIA AFTER TRANSIENT DEPLETION AND REPOPULATION AT DIFFERENT AGES
Z Łuczak-Sobotkowska, P Rosa, M Banqueri, N Ochocka, A Lenkiewicz, ...
IBRO Neuroscience Reports 15, S114-S115, 2023
2023
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