Dynamic analysis of stochastic transcription cycles CV Harper, B Finkenstädt, DJ Woodcock, S Friedrichsen, S Semprini, ... PLoS biology 9 (4), e1000607, 2011 | 254 | 2011 |
Sequencing of prostate cancers identifies new cancer genes, routes of progression and drug targets DC Wedge, G Gundem, T Mitchell, DJ Woodcock, I Martincorena, M Ghori, ... Nature genetics 50 (5), 682-692, 2018 | 232 | 2018 |
Physiological levels of TNFα stimulation induce stochastic dynamics of NF-κB responses in single living cells DA Turner, P Paszek, DJ Woodcock, DE Nelson, CA Horton, Y Wang, ... Journal of cell science 123 (16), 2834-2843, 2010 | 161 | 2010 |
The evolutionary landscape of colorectal tumorigenesis W Cross, M Kovac, V Mustonen, D Temko, H Davis, AM Baker, S Biswas, ... Nature ecology & evolution 2 (10), 1661-1672, 2018 | 114 | 2018 |
Spatially resolved clonal copy number alterations in benign and malignant tissue A Erickson, M He, E Berglund, M Marklund, R Mirzazadeh, N Schultz, ... Nature 608 (7922), 360-367, 2022 | 103 | 2022 |
Genomic copy number predicts esophageal cancer years before transformation S Killcoyne, E Gregson, DC Wedge, DJ Woodcock, MD Eldridge, ... Nature medicine 26 (11), 1726-1732, 2020 | 103 | 2020 |
Temperature regulates NF-κB dynamics and function through timing of A20 transcription CV Harper, DJ Woodcock, C Lam, M Garcia-Albornoz, A Adamson, ... Proceedings of the National Academy of Sciences 115 (22), E5243-E5249, 2018 | 59 | 2018 |
Lineage‐specific plasmid acquisition and the evolution of specialized pathogens in Bacillus thuringiensis and the Bacillus cereus group G Meric, L Mageiros, B Pascoe, DJ Woodcock, E Mourkas, S Lamble, ... Molecular ecology 27 (7), 1524-1540, 2018 | 54 | 2018 |
Prostate cancer evolution from multilineage primary to single lineage metastases with implications for liquid biopsy DJ Woodcock, E Riabchenko, S Taavitsainen, M Kankainen, G Gundem, ... Nature communications 11 (1), 5070, 2020 | 52 | 2020 |
Quantifying intrinsic and extrinsic noise in gene transcription using the linear noise approximation: An application to single cell data B Finkenstädt, DJ Woodcock, M Komorowski, CV Harper, JRE Davis, ... The Annals of Applied Statistics, 1960-1982, 2013 | 50 | 2013 |
The long non‐coding RNA Paupar promotes KAP1‐dependent chromatin changes and regulates olfactory bulb neurogenesis I Pavlaki, F Alammari, B Sun, N Clark, T Sirey, S Lee, DJ Woodcock, ... The EMBO journal 37 (10), e98219, 2018 | 49 | 2018 |
Genomic plasticity and rapid host switching can promote the evolution of generalism: a case study in the zoonotic pathogen Campylobacter DJ Woodcock, P Krusche, NJC Strachan, KJ Forbes, FM Cohan, G Méric, ... Scientific Reports 7 (1), 9650, 2017 | 34 | 2017 |
Evidence for phenotypic plasticity among multihost Campylobacter jejuni and C. coli lineages, obtained using ribosomal multilocus sequence typing and Raman spectroscopy DS Read, DJ Woodcock, NJC Strachan, KJ Forbes, FM Colles, ... Applied and environmental microbiology 79 (3), 965-973, 2013 | 34 | 2013 |
A systematic review of prostate cancer heterogeneity: understanding the clonal ancestry of multifocal disease A Erickson, A Hayes, T Rajakumar, C Verrill, RJ Bryant, FC Hamdy, ... European Urology Oncology 4 (3), 358-369, 2021 | 21 | 2021 |
Multiplexing information flow through dynamic signalling systems G Minas, DJ Woodcock, L Ashall, CV Harper, MRH White, DA Rand PLoS computational biology 16 (8), e1008076, 2020 | 9 | 2020 |
A hierarchical model of transcriptional dynamics allows robust estimation of transcription rates in populations of single cells with variable gene copy number DJ Woodcock, KW Vance, M Komorowski, G Koentges, B Finkenstädt, ... Bioinformatics 29 (12), 1519-1525, 2013 | 8 | 2013 |
Subclone eradication analysis identifies targets for enhanced cancer therapy and reveals L1 retrotransposition as a dynamic source of cancer heterogeneity K Ketola, H Kaljunen, S Taavitsainen, R Kaarijärvi, E Järvelä, ... Cancer research 81 (19), 4901-4909, 2021 | 7 | 2021 |
The spatial landscape of clonal somatic mutations in benign and malignant tissue A Erickson, E Berglund, M He, M Marklund, R Mirzazadeh, N Schultz, ... bioRxiv, 2021.07. 12.452018, 2021 | 7 | 2021 |
The architecture of clonal expansions in morphologically normal tissue from cancerous and non-cancerous prostates C Buhigas, AY Warren, WK Leung, HC Whitaker, HJ Luxton, S Hawkins, ... Molecular cancer 21 (1), 183, 2022 | 5 | 2022 |
A Bayesian hierarchical diffusion model for estimating kinetic parameters and cell-to-cell variability DJ Woodcock, M Komorowski, B Finkenstädt, CV Harper, JRE Davis, ... University of Warwick. Centre for Research in Statistical Methodology 2011 (10), 2011 | 4 | 2011 |