Follow
Canan Atilgan
Canan Atilgan
Professor of Materials Science and Nano Enginering, Sabanci University
Verified email at sabanciuniv.edu - Homepage
Title
Cited by
Cited by
Year
Small-world communication of residues and significance for protein dynamics
AR Atilgan, P Akan, C Baysal
Biophysical journal 86 (1), 85-91, 2004
3842004
Perturbation-response scanning reveals ligand entry-exit mechanisms of ferric binding protein
C Atilgan, AR Atilgan
PLoS computational biology 5 (10), e1000544, 2009
2282009
Manipulation of conformational change in proteins by single-residue perturbations
C Atilgan, ZN Gerek, SB Ozkan, AR Atilgan
Biophysical journal 99 (3), 933-943, 2010
1552010
MD-TASK: a software suite for analyzing molecular dynamics trajectories
DK Brown, DL Penkler, O Sheik Amamuddy, C Ross, AR Atilgan, ...
Bioinformatics 33 (17), 2768-2771, 2017
1462017
Screened nonbonded interactions in native proteins manipulate optimal paths for robust residue communication
AR Atilgan, D Turgut, C Atilgan
Biophysical journal 92 (9), 3052-3062, 2007
802007
Noncovalent intramolecular interactions in the monomers and oligomers of the acceptor and donor type of low band gap conducting polymers
AS Özen, C Atilgan, G Sonmez
The Journal of Physical Chemistry C 111 (44), 16362-16371, 2007
792007
Allosteric modulation of human Hsp90α conformational dynamics
DL Penkler, C Atilgan, O Tastan Bishop
Journal of Chemical Information and Modeling 58 (2), 383-404, 2018
712018
Perturbation–response scanning reveals key residues for allosteric control in Hsp70
D Penkler, O Sensoy, C Atilgan, O Tastan Bishop
Journal of Chemical Information and Modeling 57 (6), 1359-1374, 2017
642017
Consistent picture of the reversible thermal unfolding of hen egg-white lysozyme from experiment and molecular dynamics
F Meersman, C Atilgan, AJ Miles, R Bader, W Shang, A Matagne, ...
Biophysical journal 99 (7), 2255-2263, 2010
642010
High-order epistasis in catalytic power of dihydrofolate reductase gives rise to a rugged fitness landscape in the presence of trimethoprim selection
YT Tamer, IK Gaszek, H Abdizadeh, TA Batur, KA Reynolds, AR Atilgan, ...
Molecular biology and evolution 36 (7), 1533-1550, 2019
612019
Network-based models as tools hinting at nonevident protein functionality
C Atilgan, OB Okan, AR Atilgan
Annual review of biophysics 41, 205-225, 2012
562012
Mapping and reverse-mapping of the morphologies for a molecular understanding of the self-assembly of fluorinated block copolymers
G Kacar, C Atilgan, AS Ozen
The Journal of Physical Chemistry C 114 (1), 370-382, 2010
512010
Relaxation kinetics and the glassiness of proteins: the case of bovine pancreatic trypsin inhibitor
C Baysal, AR Atilgan
Biophysical Journal 83 (2), 699-705, 2002
512002
A trimethoprim derivative impedes antibiotic resistance evolution
MS Manna, YT Tamer, I Gaszek, N Poulides, A Ahmed, X Wang, ...
Nature communications 12 (1), 2949, 2021
492021
Designing molecular dynamics simulations to shift populations of the conformational states of calmodulin
AO Aykut, AR Atilgan, C Atilgan
PLoS computational biology 9 (12), e1003366, 2013
482013
Elucidating the structural mechanisms for biological activity of the chemokine family
C Baysal, AR Atilgan
Proteins: Structure, Function, and Bioinformatics 43 (2), 150-160, 2001
452001
Complete mapping of the morphologies of some linear and graft fluorinated co-oligomers in an aprotic solvent by dissipative particle dynamics
A Sema Özen, U Sen, C Atilgan
The Journal of chemical physics 124 (6), 2006
412006
MODE-TASK: large-scale protein motion tools
C Ross, B Nizami, M Glenister, O Sheik Amamuddy, AR Atilgan, C Atilgan, ...
Bioinformatics 34 (21), 3759-3763, 2018
402018
Coordination topology and stability for the native and binding conformers of chymotrypsin inhibitor 2
C Baysal, AR Atilgan
Proteins: Structure, Function, and Bioinformatics 45 (1), 62-70, 2001
402001
Free energy based populations of interconverting microstates of a cyclic peptide lead to the experimental NMR data
C Baysal, H Meirovitch
Biopolymers: Original Research on Biomolecules 50 (3), 329-344, 1999
401999
The system can't perform the operation now. Try again later.
Articles 1–20