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David Soloveichik
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Cited by
Year
Brief Announcement: Optimally Encoding Information in Chemical Reaction Networks
A Luchsinger, D Doty, D Soloveichik
Proceedings of the 43rd ACM Symposium on Principles of Distributed Computing …, 2024
2024
Molecular computation at equilibrium via programmable entropy
B Wang, C Chalk, D Doty, D Soloveichik
bioRxiv, 2024.09. 13.612990, 2024
2024
Harvesting Brownian Motion: Zero Energy Computational Sampling
D Doty, N Kornerup, A Luchsinger, L Orshansky, D Soloveichik, D Woods
arXiv preprint arXiv:2309.06957, 2023
2023
Parallel molecular computation on digital data stored in DNA
B Wang, SS Wang, C Chalk, AD Ellington, D Soloveichik
Proceedings of the National Academy of Sciences 120 (37), e2217330120, 2023
92023
Optimal Information Encoding in Chemical Reaction Networks
A Luchsinger, D Doty, D Soloveichik
arXiv preprint arXiv:2307.01939, 2023
32023
Thermodynamically Driven Signal Amplification
J Petrack, D Soloveichik, D Doty
arXiv preprint arXiv:2307.01550, 2023
22023
Rate-independent computation in continuous chemical reaction networks
HL Chen, D Doty, W Reeves, D Soloveichik
Journal of the ACM 70 (3), 1-61, 2023
72023
Speed and correctness guarantees for programmable enthalpy-neutral DNA reactions
B Wang, C Thachuk, D Soloveichik
ACS Synthetic Biology 12 (4), 993-1006, 2023
52023
29th International Conference on DNA Computing and Molecular Programming (DNA 29)
A Shalaby, C Thachuk, D Woods, F Becker, S Heydarshahi, A Condon, ...
Schloss Dagstuhl-Leibniz-Zentrum für Informatik GmbH, 2023
12023
Proceedings of the 29th International Conference on DNA Computing and Molecular Programming (DNA 29)
J Petrack, D Soloveichik, D Doty
Schloss Dagstuhl–Leibniz-Zentrum für Informatik, 2023
2023
Programming and training rate-independent chemical reaction networks
M Vasić, C Chalk, A Luchsinger, S Khurshid, D Soloveichik
Proceedings of the National Academy of Sciences 119 (24), e2111552119, 2022
162022
Classifying enthalpy-neutral DNA strand displacement cascades: trading off desired and undesired signal propagation
B Wang, C Thachuk, D Soloveichik
bioRxiv, 2022.04. 13.488226, 2022
2022
Tight Bounds on the Spooky Pebble Game: Recycling Qubits with Measurements
N Kornerup, J Sadun, D Soloveichik
arXiv preprint arXiv:2110.08973, 2021
12021
The spooky pebble game
N Kornerup, J Sadun, D Soloveichik
arXiv e-prints, arXiv: 2110.08973, 2021
32021
Molecular machines from topological linkages
K Breik, A Luchsinger, D Soloveichik
27th International Conference on DNA Computing and Molecular Programming …, 2021
32021
Deep molecular programming: a natural implementation of binary-weight ReLU neural networks
M Vasic, C Chalk, S Khurshid, D Soloveichik
International Conference on Machine Learning, 9701-9711, 2020
212020
CRN++: Molecular programming language
M Vasić, D Soloveichik, S Khurshid
Natural Computing 19 (2), 391-407, 2020
602020
DNA punch cards for storing data on native DNA sequences via enzymatic nicking
SK Tabatabaei, B Wang, NBM Athreya, B Enghiad, AG Hernandez, ...
Nature communications 11 (1), 1742, 2020
108*2020
26th International Conference on DNA Computing and Molecular Programming (DNA 26)
A Mohammed, N Jonoska, M Saito, RF Johnson, L Qian, H Hashemi, ...
Schloss Dagstuhl-Leibniz-Zentrum für Informatik GmbH, 2020
2020
Programming substrate-independent kinetic barriers with thermodynamic binding networks
K Breik, C Chalk, D Doty, D Haley, D Soloveichik
IEEE/ACM transactions on computational biology and bioinformatics 18 (1 …, 2019
112019
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Articles 1–20