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Simone Coughlan
Simone Coughlan
Unknown affiliation
Verified email at dnanexus.com
Title
Cited by
Cited by
Year
Differences in fecal microbiomes and metabolomes of people with vs without irritable bowel syndrome and bile acid malabsorption
IB Jeffery, A Das, E O’Herlihy, S Coughlan, K Cisek, M Moore, F Bradley, ...
Gastroenterology 158 (4), 1016-1028. e8, 2020
1602020
Pro-inflammatory flagellin proteins of prevalent motile commensal bacteria are variably abundant in the intestinal microbiome of elderly humans
BA Neville, PO Sheridan, HMB Harris, S Coughlan, HJ Flint, SH Duncan, ...
PLoS One 8 (7), e68919, 2013
472013
The gut virome in Irritable Bowel Syndrome differs from that of controls
S Coughlan, A Das, E O’Herlihy, F Shanahan, PW O’Toole, IB Jeffery
Gut Microbes 13 (1), 1-15, 2021
462021
The genome of Leishmania adleri from a mammalian host highlights chromosome fission in Sauroleishmania
S Coughlan, P Mulhair, M Sanders, G Schonian, JA Cotton, T Downing
Scientific reports 7 (1), 1-13, 2017
382017
Leishmania naiffi and Leishmania guyanensis reference genomes highlight genome structure and gene evolution in the Viannia subgenus
S Coughlan, AS Taylor, E Feane, M Sanders, G Schonian, JA Cotton, ...
Royal Society Open Science, 2018
352018
Redeploying β-lactam antibiotics as a novel antivirulence strategy for the treatment of methicillin-resistant Staphylococcus aureus infections
EM Waters, JK Rudkin, S Coughlan, GC Clair, JN Adkins, S Gore, G Xia, ...
The Journal of infectious diseases 215 (1), 80-87, 2017
332017
Developing educational resources for population genetics in R: An open and collaborative approach
ZN Kamvar, MM López‐Uribe, S Coughlan, NJ Grünwald, H Lapp, ...
Molecular ecology resources 17 (1), 120-128, 2017
302017
Tandem Amplification of the Staphylococcal Cassette Chromosome mec Element Can Drive High-Level Methicillin Resistance in Methicillin-Resistant Staphylococcus aureus
LA Gallagher, S Coughlan, NS Black, P Lalor, EM Waters, B Wee, ...
Antimicrobial agents and chemotherapy 61 (9), e00869-17, 2017
222017
Whole-genome sequencing of SARS-CoV-2 in the Republic of Ireland during waves 1 and 2 of the pandemic
PWG Mallon, F Crispie, G Gonzalez, W Tinago, AA Garcia Leon, ...
MedRxiv, 2021.02. 09.21251402, 2021
132021
Volatile Compounds From Bacillus, Serratia, and Pseudomonas Promote Growth and Alter the Transcriptional Landscape of Solanum tuberosum in a Passively Ventilated Growth System
D Heenan-Daly, S Coughlan, E Dillane, BD Prestwich
Frontiers in Microbiology 12, 2021
132021
Genome-wide Variant Discovery using Sequence Assembly, Mapping and Population-Wide Analysis
S Coughlan, S Barreira, C Seoighe, T Downing
Bioinformatics and Data Analysis in Microbiology, 51, 2014
42014
GNOSIS: an R Shiny app supporting cancer genomics survival analysis with cBioPortal
L King, A Flaus, S Coughlan, E Holian, A Golden
HRB Open Research 5, 2022
32022
CDC7 Inhibition Drives an Inflammatory Response and a p53-Dependent Senescent-Like State in Breast Epithelial Cells
C Cazzaniga, A Göder, A Quinlan, MD Rainey, S Coughlan, S Bernard, ...
Available at SSRN 4514474, 0
1
The African Society of Human Genetics successfully launches global data science workshops
V Nembaware, D Bennett, ER Chimusa, T Chikowore, R Daodu, ...
Trends in Genetics, 2023
2023
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