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Stephan Fischer
Stephan Fischer
Adresse e-mail validée de cshl.edu
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Comparative cellular analysis of motor cortex in human, marmoset and mouse
TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ...
Nature 598 (7879), 111-119, 2021
3882021
The surprising creativity of digital evolution: A collection of anecdotes from the evolutionary computation and artificial life research communities
J Lehman, J Clune, D Misevic, C Adami, L Altenberg, J Beaulieu, ...
Artificial life 26 (2), 274-306, 2020
3192020
A multimodal cell census and atlas of the mammalian primary motor cortex
Principal manuscript editors, Analysis coordination, ...
Nature 598 (7879), 86-102, 2021
2662021
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Z Yao, H Liu, F Xie, S Fischer, RS Adkins, AI Aldridge, SA Ament, ...
Nature 598 (7879), 103-110, 2021
1962021
High-throughput mapping of long-range neuronal projection using in situ sequencing
X Chen, YC Sun, H Zhan, JM Kebschull, S Fischer, K Matho, ZJ Huang, ...
Cell 179 (3), 772-786. e19, 2019
1642019
Cellular anatomy of the mouse primary motor cortex
R Muñoz-Castañeda, B Zingg, KS Matho, X Chen, Q Wang, NN Foster, ...
Nature 598 (7879), 159-166, 2021
1532021
Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse
TE Bakken, NL Jorstad, Q Hu, BB Lake, W Tian, BE Kalmbach, M Crow, ...
BioRxiv, 2020.03. 31.016972, 2020
732020
In silico experimental evolution: a tool to test evolutionary scenarios
B Batut, DP Parsons, S Fischer, G Beslon, C Knibbe
BMC bioinformatics 14, 1-11, 2013
692013
An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
Z Yao, H Liu, F Xie, S Fischer, AS Booeshaghi, RS Adkins, AI Aldridge, ...
Biorxiv, 2020.02. 29.970558, 2020
632020
Integrating barcoded neuroanatomy with spatial transcriptional profiling enables identification of gene correlates of projections
YC Sun, X Chen, S Fischer, S Lu, H Zhan, J Gillis, AM Zador
Nature neuroscience 24 (6), 873-885, 2021
622021
The neuroprotective impact of the leak potassium channel TASK1 on stroke development in mice
SG Meuth, C Kleinschnitz, T Broicher, M Austinat, S Braeuninger, S Bittner, ...
Neurobiology of disease 33 (1), 1-11, 2009
592009
Automated generation of bacterial resource allocation models
A Bulović, S Fischer, M Dinh, F Golib, W Liebermeister, C Poirier, ...
Metabolic engineering 55, 12-22, 2019
542019
Modeling erythroblastic islands: using a hybrid model to assess the function of central macrophage
S Fischer, P Kurbatova, N Bessonov, O Gandrillon, V Volpert, F Crauste
Journal of theoretical biology 298, 92-106, 2012
372012
Hybrid model of erythropoiesis and leukemia treatment with cytosine arabinoside
P Kurbatova, S Bernard, N Bessonov, F Crauste, I Demin, C Dumontet, ...
SIAM Journal on Applied Mathematics 71 (6), 2246-2268, 2011
322011
Single-cell co-expression analysis reveals that transcriptional modules are shared across cell types in the brain
BD Harris, M Crow, S Fischer, J Gillis
Cell systems 12 (7), 748-756. e3, 2021
232021
Application of hybrid models to blood cell production in the bone marrow
N Bessonov, F Crauste, S Fischer, P Kurbatova, V Volpert
Mathematical Modelling of Natural Phenomena 6 (7), 2-12, 2011
232011
A multimodal cell census and atlas of the mammalian primary motor cortex
BRAIN Initiative Cell Census Network (BICCN), RS Adkins, AI Aldridge, ...
Biorxiv, 2020.10. 19.343129, 2020
222020
Scaling up reproducible research for single-cell transcriptomics using MetaNeighbor
S Fischer, M Crow, BD Harris, J Gillis
Nature protocols 16 (8), 4031-4067, 2021
212021
A model for genome size evolution
S Fischer, S Bernard, G Beslon, C Knibbe
Bulletin of mathematical biology 76, 2249-2291, 2014
212014
How many markers are needed to robustly determine a cell's type?
S Fischer, J Gillis
Iscience 24 (11), 2021
162021
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