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Christopher S Miller
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The database of interacting proteins: 2004 update
L Salwinski, CS Miller, AJ Smith, FK Pettit, JU Bowie, D Eisenberg
Nucleic acids research 32 (suppl 1), D449-D451, 2004
25672004
The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families
S Yooseph, G Sutton, DB Rusch, AL Halpern, SJ Williamson, ...
PLoS Biol 5 (3), e16, 2007
10022007
Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla
KC Wrighton, BC Thomas, I Sharon, CS Miller, CJ Castelle, ...
Science 337 (6102), 1661-1665, 2012
6472012
The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples
SJ Williamson, DB Rusch, S Yooseph, AL Halpern, KB Heidelberg, ...
PLoS One 3 (1), e1456, 2008
4132008
EMIRGE: reconstruction of full-length ribosomal genes from microbial community short read sequencing data
CS Miller, BJ Baker, BC Thomas, SW Singer, JF Banfield
Genome Biol 12 (5), R44, 2011
3822011
Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants
B Brooks, BA Firek, CS Miller, I Sharon, BC Thomas, R Baker, ...
Microbiome 2 (1), 1, 2014
2832014
Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions
JC Angle, TH Morin, LM Solden, AB Narrowe, GJ Smith, MA Borton, ...
Nature Communications 8 (1), 1567, 2017
2242017
Short-Read Assembly of Full-Length 16S Amplicons Reveals Bacterial Diversity in Subsurface Sediments
CS Miller, KM Handley, KC Wrighton, KR Frischkorn, BC Thomas, ...
PloS one 8 (2), e56018, 2013
2072013
Host-derived oxidized phospholipids and HDL regulate innate immunity in human leprosy
D Cruz, AD Watson, CS Miller, D Montoya, MT Ochoa, PA Sieling, ...
The Journal of clinical investigation 118 (8), 2917-2928, 2008
1892008
Perturbation and restoration of the fathead minnow gut microbiome after low-level triclosan exposure
AB Narrowe, M Albuthi-Lantz, EP Smith, KJ Bower, TM Roane, AM Vajda, ...
Microbiome 3 (1), 6, 2015
1572015
Glycoside Hydrolase Activities of Thermophilic Bacterial Consortia Adapted to Switchgrass
JM Gladden, M Allgaier, CS Miller, TC Hazen, JS VanderGheynst, ...
Applied and environmental microbiology 77 (16), 5804-5812, 2011
1262011
Biostimulation induces syntrophic interactions that impact C, S and N cycling in a sediment microbial community
KM Handley, NC VerBerkmoes, CI Steefel, KH Williams, I Sharon, ...
The ISME Journal, 2012
1132012
High‐resolution sequencing reveals unexplored archaeal diversity in freshwater wetland soils
AB Narrowe, JC Angle, RA Daly, KC Stefanik, KC Wrighton, CS Miller
Environmental microbiology 19 (6), 2192-2209, 2017
632017
Heterotrophic Archaea Contribute to Carbon Cycling in Low-pH, Suboxic Biofilm Communities.
NB Justice, C Pan, R Mueller, SE Spaulding, V Shah, CL Sun, AP Yelton, ...
Applied and environmental microbiology, 2012
602012
Fungi contribute critical but spatially varying roles in nitrogen and carbon cycling in acid mine drainage
AC Mosier, C Miller, K Frischkorn, R Ohm, Z Li, K LaButti, A Lapidus, ...
Frontiers in Microbiology 7, 238, 2016
572016
Using inferred residue contacts to distinguish between correct and incorrect protein models
CS Miller, D Eisenberg
Bioinformatics 24 (14), 1575-1582, 2008
552008
Disturbed subsurface microbial communities follow equivalent trajectories despite different structural starting points
KM Handley, KC Wrighton, CS Miller, MJ Wilkins, RS Kantor, BC Thomas, ...
Environmental Microbiology, 2014
412014
Complex evolutionary history of translation Elongation Factor 2 and diphthamide biosynthesis in Archaea and parabasalids
AB Narrowe, A Spang, CW Stairs, EF Caceres, BJ Baker, CS Miller, ...
Genome biology and evolution 10 (9), 2380-2393, 2018
392018
A novel three-unit tRNA splicing endonuclease found in ultrasmall Archaea possesses broad substrate specificity
K Fujishima, J Sugahara, CS Miller, BJ Baker, M Di Giulio, K Takesue, ...
Nucleic acids research 39 (22), 9695-9704, 2011
352011
Metagenomic and lipid analyses reveal a diel cycle in a hypersaline microbial ecosystem
K Andrade, J Logemann, KB Heidelberg, JB Emerson, LR Comolli, ...
The ISME journal, 2015
342015
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