| Analysis of spatial-temporal gene expression patterns reveals dynamics and regionalization in developing mouse brain SJ Chou, C Wang, N Sintupisut, ZX Niou, CH Lin, KC Li, CH Yeang Scientific reports 6 (1), 19274, 2016 | 28 | 2016 |
| Multimodal network diffusion predicts future disease–gene–chemical associations CH Lin, DM Konecki, M Liu, SJ Wilson, H Nassar, AD Wilkins, DF Gleich, ... Bioinformatics 35 (9), 1536-1543, 2019 | 19 | 2019 |
| Evolution of cis-regulatory elements in yeast de novo and duplicated new genes ZTY Tsai, HK Tsai, JH Cheng, CH Lin, YF Tsai, D Wang BMC genomics 13, 1-12, 2012 | 16 | 2012 |
| Using interpretable deep learning to model cancer dependencies CH Lin, O Lichtarge Bioinformatics 37 (17), 2675-2681, 2021 | 12 | 2021 |
| DISCOVERY OF FUNCTIONAL AND DISEASE PATHWAYS BY COMMUNITY DETECTION IN PROTEIN-PROTEIN INTERACTION NETWORKS SJ Wilson, AD Wilkins, CH Lin, RC Lua, O Lichtarge PACIFIC SYMPOSIUM ON BIOCOMPUTING 2017, 336-347, 2017 | 12 | 2017 |
| A general calculus of fitness landscapes finds genes under selection in cancers TK Hsu, J Asmussen, A Koire, BK Choi, MA Gadhikar, E Huh, CH Lin, ... Genome research 32 (5), 916-929, 2022 | 9 | 2022 |
| Examining the condition-specific antisense transcription in S. cerevisiae and S. paradoxus KBS Swamy, CH Lin, MR Yen, CY Wang, D Wang BMC genomics 15, 1-12, 2014 | 9 | 2014 |
| Automated literature mining and hypothesis generation through a network of Medical Subject Headings SJ Wilson, AD Wilkins, MV Holt, BK Choi, D Konecki, CH Lin, A Koire, ... bioRxiv, 403667, 2018 | 8 | 2018 |
| Role of antisense RNAs in evolution of yeast regulatory complexity CH Lin, ZTY Tsai, D Wang Genomics 102 (5-6), 484-490, 2013 | 8 | 2013 |
| Discovery of disease-and drug-specific pathways through community structures of a literature network M Pham, S Wilson, H Govindarajan, CH Lin, O Lichtarge Bioinformatics 36 (6), 1881-1888, 2020 | 7 | 2020 |
| A quantitative model for the rate-limiting process of UGA alternative assignments to stop and selenocysteine codons YF Chen, HC Lin, KN Chuang, CH Lin, HCS Yen, CH Yeang PLoS Computational Biology 13 (2), e1005367, 2017 | 4 | 2017 |
| Incidence of PI3K pathway aberrations and their impact on response to neoadjuvant chemotherapy (NACT) in triple-negative breast cancer (TNBC) subtypes. RK Basho, A Trevarton, KR Hess, C Fu, R Lau, CH Lin, O Lichtarge, ... Journal of Clinical Oncology 36 (15_suppl), 588-588, 2018 | | 2018 |
| Abstract P2-10-05: The impact of TP53 mutation and pathological response to neoadjuvant chemotherapy on triple negative breast cancer outcomes Z Mitri, CH Lin, KR Hess, A Thompson, O Lichtarge, R Hubbard, C Fu, ... Cancer Research 78 (4_Supplement), P2-10-05-P2-10-05, 2018 | | 2018 |
| The impact of TP53 mutation and pathological response to neoadjuvant chemotherapy on triple negative breast cancer outcomes Z Mitri, CH Lin, KR Hess, A Thompson, O Lichtarge, R Hubbard, C Fu, ... CANCER RESEARCH 78 (4), 2018 | | 2018 |
