Aerobic respiratory chain of Escherichia coli is not allowed to work in fully uncoupled mode VB Borisov, R Murali, ML Verkhovskaya, DA Bloch, H Han, RB Gennis, ... Proceedings of the National Academy of Sciences 108 (42), 17320-17324, 2011 | 155 | 2011 |
Experimentally-validated correlation analysis reveals new anaerobic methane oxidation partnerships with consortium-level heterogeneity in diazotrophy KS Metcalfe, R Murali, SW Mullin, SA Connon, VJ Orphan The ISME Journal, 2020 | 33 | 2020 |
Evolution of the cytochrome bd oxygen reductase superfamily and the function of CydAA’ in Archaea R Murali, RB Gennis, J Hemp The ISME Journal 15 (12), 3534-3548, 2021 | 26 | 2021 |
Functional importance of Glutamate-445 and Glutamate-99 in proton-coupled electron transfer during oxygen reduction by cytochrome bd from Escherichia coli R Murali, RB Gennis Biochimica et Biophysica Acta (BBA)-Bioenergetics 1859 (8), 577-590, 2018 | 19 | 2018 |
Evolution of quinol oxidation within the heme‑copper oxidoreductase superfamily R Murali, J Hemp, RB Gennis Biochimica et Biophysica Acta (BBA)-Bioenergetics 1863 (8), 148907, 2022 | 14 | 2022 |
Stoichiometry of proton pumping by the cbb3-type oxygen reductase in whole cells of Rhodobacter capsulatus at pH 7 is about 0.5 H+ per electron R Murali, GG Yildiz, F Daldal, RB Gennis Proceedings of the National Academy of Sciences 109 (32), E2144-E2144, 2012 | 12 | 2012 |
Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea R Murali, H Yu, DR Speth, F Wu, KS Metcalfe, A Crémière, R Laso-Pèrez, ... PLoS Biology 21 (9), e3002292, 2023 | 4 | 2023 |
Diversity and evolution of nitric oxide reduction R Murali, LA Pace, RA Sanford, LM Ward, M Lynes, R Hatzenpichler, ... bioRxiv, 2021.10. 15.464467, 2021 | 4 | 2021 |
FIND: Identifying Functionally and Structurally Important Features in Protein Sequences with Deep Neural Networks R Murali, J Hemp, V Orphan, Y Bisk bioRxiv, 592808, 2019 | 3 | 2019 |
Studies on the cytochrome bd-type oxygen reductase superfamily and the discovery of a novel nitric oxide reductase R Murali University of Illinois at Urbana-Champaign, 2016 | 3 | 2016 |
Physiological adaptation of sulfate reducing bacteria in syntrophic partnership with anaerobic methanotrophic archaea R Murali, H Yu, DR Speth, F Wu, KS Metcalfe, A Crémière, R Laso-Pèrez, ... bioRxiv, 2022.11. 23.517749, 2022 | 2 | 2022 |
Diversity and evolution of nitric oxide reduction J Hemp, R Murali, LA Pace, RA Sanford, R Hatzenpichler, L Ward, ... bioRxiv, 2021 | 1 | 2021 |
Endeavors in Microbial Reactive Transport: Physiological Constraints and the Challenge of Model Parameterization K Craig, R Murali, VJ Orphan, CD Meile AGU23, 2023 | | 2023 |
Imaging of gene expression in single cells by visualizing mRNA using HCR-FISH v3. 0 on filtered cells from marine sediment R Murali, VJ Orphan | | 2023 |
Metabolic evolution of pyranopterin-dependent biochemistry JE Goldford, R Murali, JS Valentine, WW Fischer bioRxiv, 2023.09. 01.555371, 2023 | | 2023 |
An evolutionary timescale for Bacteria calibrated using the Great Oxidation Event AA Davin, BJ Woodcroft, RM Soo, R Murali, D Schrempf, J Clark, ... bioRxiv, 2023.08. 08.552427, 2023 | | 2023 |
Do Microbes from Cold Methane Seep Sediments Prefer Sulfur Redox Intermediates over Sulfate?” EM Eitel, R Murali, DR Utter, F Wu, S Lim, SA Connon, AL Sessions, ... Fall Meeting 2022, 2022 | | 2022 |
Quinol oxidases in the superfamily of heme-copper oxidoreductases and the cryoEM structure of the cytochrome bo3 ubiquinol oxidase from E. coli RB Gennis, J Li, L Han, F Vallese, Z Ding, SK Choi, S Hong, Y Luo, B Liu, ... Biochimica et Biophysica Acta (BBA)-Bioenergetics 1863, 148667, 2022 | | 2022 |
16S Amplicon Survey of Hydrocarbon Seeps Near Costa Rica Yields Novel Partnership Between Sulfate-Reducing Desulfococcus sp. and Anaerobic Methanotroph ANME-2b K Metcalfe, R Murali, SW Mullin, SA Connon, VJ Orphan AGU Fall Meeting Abstracts 2019, OS23C-1791, 2019 | | 2019 |
Cytochrome bd-II from aerobic respiratory chain of Escherichia coli is a proton-motive force generator DA Bloch, VB Borisov, R Murali, ML Verkhovskaya, H Han, RB Gennis, ... Biochimica et Biophysica Acta (BBA)-Bioenergetics 1817, S105, 2012 | | 2012 |