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Shyamal Peddada
Shyamal Peddada
NIEHS
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Year
Analysis of composition of microbiomes: a novel method for studying microbial composition
S Mandal, W Van Treuren, RA White, M Eggesbø, R Knight, SD Peddada
Microbial ecology in health and disease 26 (1), 27663, 2015
18482015
Normalization and microbial differential abundance strategies depend upon data characteristics
S Weiss, ZZ Xu, S Peddada, A Amir, K Bittinger, A Gonzalez, C Lozupone, ...
Microbiome 5, 1-18, 2017
17302017
Analysis of compositions of microbiomes with bias correction
H Lin, SD Peddada
Nature communications 11 (1), 3514, 2020
9782020
450K epigenome-wide scan identifies differential DNA methylation in newborns related to maternal smoking during pregnancy
BR Joubert, SE Håberg, RM Nilsen, X Wang, SE Vollset, SK Murphy, ...
Environmental health perspectives 120 (10), 1425-1431, 2012
8302012
Parkinson's disease and Parkinson's disease medications have distinct signatures of the gut microbiome
EM Hill‐Burns, JW Debelius, JT Morton, WT Wissemann, MR Lewis, ...
Movement disorders 32 (5), 739-749, 2017
7862017
American gut: an open platform for citizen science microbiome research
D McDonald, E Hyde, JW Debelius, JT Morton, A Gonzalez, G Ackermann, ...
Msystems 3 (3), 10.1128/msystems. 00031-18, 2018
6552018
Growth of uterine leiomyomata among premenopausal black and white women
SD Peddada, SK Laughlin, K Miner, JP Guyon, K Haneke, HL Vahdat, ...
Proceedings of the National Academy of Sciences 105 (50), 19887-19892, 2008
4612008
Analysis of microbiome data in the presence of excess zeros
A Kaul, S Mandal, O Davidov, SD Peddada
Frontiers in microbiology 8, 283205, 2017
2772017
Maternal plasma folate impacts differential DNA methylation in an epigenome-wide meta-analysis of newborns
BR Joubert, HT Den Dekker, JF Felix, J Bohlin, S Ligthart, E Beckett, ...
Nature communications 7 (1), 10577, 2016
2622016
Gene selection and clustering for time-course and dose–response microarray experiments using order-restricted inference
SD Peddada, EK Lobenhofer, L Li, CA Afshari, CR Weinberg, ...
Bioinformatics 19 (7), 834-841, 2003
2472003
Immunization with a heat-killed preparation of the environmental bacterium Mycobacterium vaccae promotes stress resilience in mice
SO Reber, PH Siebler, NC Donner, JT Morton, DG Smith, JM Kopelman, ...
Proceedings of the National Academy of Sciences 113 (22), E3130-E3139, 2016
2382016
Analysis of microbial compositions: a review of normalization and differential abundance analysis
H Lin, SD Peddada
NPJ biofilms and microbiomes 6 (1), 60, 2020
1882020
Development of gut microbiota in infants not exposed to medical interventions
M Eggesbø, B Moen, S Peddada, D Baird, J Rugtveit, T Midtvedt, ...
Apmis 119 (1), 17-35, 2011
1872011
Meta-analyses on prevalence of selected Parkinson’s nonmotor symptoms before and after diagnosis
H Chen, EJ Zhao, W Zhang, Y Lu, R Liu, X Huang, AJ Ciesielski-Jones, ...
Translational neurodegeneration 4, 1-8, 2015
1722015
The OECD program to validate the rat uterotrophic bioassay. Phase 2: dose-response studies.
J Kanno, L Onyon, S Peddada, J Ashby, E Jacob, W Owens
Environmental Health Perspectives 111 (12), 1530-1549, 2003
1722003
Confidence interval estimation subject to order restrictions
JTG Hwang, SD Peddada
The Annals of Statistics 22 (1), 67-93, 1994
1721994
Genetic pathways and mutation profiles of human cancers: site-and exposure-specific patterns
IA Lea, MA Jackson, X Li, S Bailey, SD Peddada, JK Dunnick
Carcinogenesis 28 (9), 1851-1858, 2007
1482007
Interleukin-1β–induced mucin production in human airway epithelium is mediated by cyclooxygenase-2, prostaglandin E2 receptors, and cyclic AMP-protein kinase A signaling
T Gray, P Nettesheim, C Loftin, JS Koo, J Bonner, S Peddada, ...
Molecular pharmacology 66 (2), 337-346, 2004
1482004
Perceptions of ethical problems with scientific journal peer review: an exploratory study
DB Resnik, C Gutierrez-Ford, S Peddada
Science and engineering ethics 14, 305-310, 2008
1342008
Environmental toxicants in breast milk of Norwegian mothers and gut bacteria composition and metabolites in their infants at 1 month
N Iszatt, S Janssen, V Lenters, C Dahl, H Stigum, R Knight, S Mandal, ...
Microbiome 7, 1-14, 2019
1322019
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Articles 1–20