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Jorge Moura de Sousa
Jorge Moura de Sousa
Verified email at pasteur.fr
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Cited by
Year
Embracing the enemy: the diversification of microbial gene repertoires by phage-mediated horizontal gene transfer
M Touchon, JAM de Sousa, EPC Rocha
Current Opinion in Microbiology 38, 66-73, 2017
2592017
Phylogenetic background and habitat drive the genetic diversification of Escherichia coli
M Touchon, A Perrin, JAM de Sousa, B Vangchhia, S Burn, CL O’Brien, ...
Plos Genetics 16 (6), e1008866, 2020
1542020
Bacteria have numerous distinctive groups of phage–plasmids with conserved phage and variable plasmid gene repertoires
E Pfeifer, JA Moura de Sousa, M Touchon, EPC Rocha
Nucleic Acids Research 49 (5), 2655-2673, 2021
962021
The Genetic Basis of Escherichia coli Pathoadaptation to Macrophages
M Miskinyte, A Sousa, RS Ramiro, JAM de Sousa, J Kotlinowski, ...
PLOS Pathogens 9 (12), e1003802, 2013
862013
Multidrug-resistant bacteria compensate for the epistasis between resistances
J Moura de Sousa, R Balbontín, P Durão, I Gordo
PLoS biology 15 (4), e2001741, 2017
842017
Bacteriophages benefit from generalized transduction
A Fillol-Salom, A Alsaadi, JAM Sousa, L Zhong, KR Foster, EPC Rocha, ...
PLoS pathogens 15 (7), e1007888, 2019
782019
Causes and consequences of bacteriophage diversification via genetic exchanges across lifestyles and bacterial taxa
JA Moura de Sousa, E Pfeifer, M Touchon, EPC Rocha
Molecular biology and evolution 38 (6), 2497-2512, 2021
552021
Selfish, promiscuous and sometimes useful: how mobile genetic elements drive horizontal gene transfer in microbial populations
M Haudiquet, JM de Sousa, M Touchon, EPC Rocha
Philosophical Transactions of the Royal Society B 377 (1861), 20210234, 2022
442022
Modular prophage interactions driven by capsule serotype select for capsule loss under phage predation
JAM de Sousa, A Buffet, M Haudiquet, EPC Rocha, O Rendueles
The ISME Journal 14 (12), 2980-2996, 2020
422020
Environmental structure drives resistance to phages and antibiotics during phage therapy and to invading lysogens during colonisation
JAM de Sousa, EPC Rocha
Scientific reports 9 (1), 1-13, 2019
392019
Genetic exchanges are more frequent in bacteria encoding capsules
O Rendueles, JAM de Sousa, A Bernheim, M Touchon, EPC Rocha
PLOS Genetics 14 (12), e1007862, 2018
392018
To catch a hijacker: abundance, evolution and genetic diversity of P4-like bacteriophage satellites
JA Moura de Sousa, EPC Rocha
Philosophical Transactions of the Royal Society B 377 (1842), 20200475, 2022
232022
Potential for adaptation overrides cost of resistance
J Moura de Sousa, A Sousa, C Bourgard, I Gordo
Future microbiology 10 (9), 1415-1431, 2015
202015
Identification and characterization of thousands of bacteriophage satellites across bacteria
JAM de Sousa, A Fillol-Salom, JR Penadés, EPC Rocha
Nucleic Acids Research 51 (6), 2759-2777, 2023
182023
An ABC method for estimating the rate and distribution of effects of beneficial mutations
JA Moura de Sousa, PRA Campos, I Gordo
Genome biology and evolution 5 (5), 794-806, 2013
182013
Horizontal gene transfer among host-associated microbes
JM de Sousa, M Lourenço, I Gordo
Cell Host & Microbe 31 (4), 513-527, 2023
162023
Trade-Offs of Escherichia coli Adaptation to an Intracellular Lifestyle in Macrophages
M Azevedo, A Sousa, J Moura de Sousa, JA Thompson, JT Proença, ...
PloS one 11 (1), e0146123, 2016
142016
Designing an Epigenetic Approach in Artificial Life: The EpiAL Model
JAB Sousa, E Costa
Agents and Artificial Intelligence, 78-90, 2010
132010
A widespread family of phage-inducible chromosomal islands only steals bacteriophage tails to spread in nature
N Alqurainy, L Miguel-Romero, JM de Sousa, J Chen, EPC Rocha, ...
Cell Host & Microbe 31 (1), 69-82. e5, 2023
92023
When bacteria are phage playgrounds: interactions between viruses, cells, and mobile genetic elements
E Pfeifer, JM Sousa, M Touchon, EPC Rocha
Current Opinion in Microbiology 70, 102230, 2022
92022
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