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Siming Zhao
Siming Zhao
Darmouth College
Verified email at dartmouth.edu
Title
Cited by
Cited by
Year
Landscape of somatic single-nucleotide and copy-number mutations in uterine serous carcinoma
S Zhao, M Choi, JD Overton, S Bellone, DM Roque, E Cocco, F Guzzo, ...
Proceedings of the National Academy of Sciences 110 (8), 2916-2921, 2013
3122013
Mutational landscape of uterine and ovarian carcinosarcomas implicates histone genes in epithelial–mesenchymal transition
S Zhao, S Bellone, S Lopez, D Thakral, C Schwab, DP English, J Black, ...
Proceedings of the National Academy of Sciences 113 (43), 12238-12243, 2016
2052016
Genomic characterization of sarcomatoid transformation in clear cell renal cell carcinoma
M Bi, S Zhao, JW Said, MJ Merino, AJ Adeniran, Z Xie, CB Nawaf, J Choi, ...
Proceedings of the National Academy of Sciences 113 (8), 2170-2175, 2016
1132016
Allele-specific open chromatin in human iPSC neurons elucidates functional disease variants
S Zhang, H Zhang, Y Zhou, M Qiao, S Zhao, A Kozlova, J Shi, AR Sanders, ...
Science 369 (6503), 561-565, 2020
832020
Whole-exome sequencing of cervical carcinomas identifies activating ERBB2 and PIK3CA mutations as targets for combination therapy
L Zammataro, S Lopez, S Bellone, F Pettinella, E Bonazzoli, E Perrone, ...
Proceedings of the National Academy of Sciences 116 (45), 22730-22736, 2019
662019
Integrated mutational landscape analysis of uterine leiomyosarcomas
J Choi, A Manzano, W Dong, S Bellone, E Bonazzoli, L Zammataro, X Yao, ...
Proceedings of the National Academy of Sciences 118 (15), e2025182118, 2021
612021
Detailed modeling of positive selection improves detection of cancer driver genes
S Zhao, J Liu, P Nanga, Y Liu, AE Cicek, N Knoblauch, C He, M Stephens, ...
Nature communications 10 (1), 3399, 2019
592019
Serial exome analysis of disease progression in premalignant gammopathies
S Zhao, M Choi, C Heuck, S Mane, B Barlogie, RP Lifton, MV Dhodapkar
Leukemia 28 (7), 1548-1552, 2014
542014
Dual CCNE1/PIK3CA targeting is synergistic in CCNE1-amplified/PIK3CA-mutated uterine serous carcinomas in vitro and in vivo
E Cocco, S Lopez, J Black, S Bellone, E Bonazzoli, F Predolini, F Ferrari, ...
British journal of cancer 115 (3), 303-311, 2016
372016
A statistical framework for mapping risk genes from de novo mutations in whole-genome-sequencing studies
Y Liu, Y Liang, AE Cicek, Z Li, J Li, RA Muhle, M Krenzer, Y Mei, Y Wang, ...
The American Journal of Human Genetics 102 (6), 1031-1047, 2018
302018
Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs
MC Ward, S Zhao, K Luo, BJ Pavlovic, MM Karimi, M Stephens, Y Gilad
Elife 7, e33084, 2018
292018
Adjusting for genetic confounders in transcriptome-wide association studies leads to reliable detection of causal genes
S Zhao, W Crouse, S Qian, K Luo, M Stephens, X He
bioRxiv, 2022.09. 27.509700, 2022
32022
Adjusting for genetic confounders in transcriptome-wide association studies improves discovery of risk genes of complex traits
S Zhao, W Crouse, S Qian, K Luo, M Stephens, X He
Nature Genetics, 1-12, 2024
22024
A Bayesian method for rare variant analysis using functional annotations and its application to Autism
S Han, N Knoblauch, G Wang, S Zhao, Y Liu, Y Xie, W Sheng, HT Nguyen, ...
bioRxiv, 828061, 2019
22019
Allele-specific open chromatin in human iPSC neurons elucidates functional non-coding disease variants
S Zhang, H Zhang, M Qiao, Y Zhou, S Zhao, A Kozlova, J Shi, AR Sanders, ...
bioRxiv, 827048, 2019
12019
Mutational landscape of uterine and ovarian carcinosarcomas.
G Menderes, S Zhao, C Schwab, S Lopez, J Black, S Bellone, DA Silasi, ...
Journal of Clinical Oncology 34 (15_suppl), 5589-5589, 2016
12016
Model-based analysis of positive selection significantly expands the list of cancer driver genes, including RNA methyltransferases
S Zhao, J Liu, P Nanga, Y Liu, AE Cicek, N Knoblauch, C He, M Stephens, ...
bioRxiv, 366823, 2018
2018
MA16. 02 Mutational Landscape of TKI Naïve and Resistant EGFR Mutant Lung Adenocarcinomas
K Hastings, J Choi, A Wurtz, Z Walther, G Cai, I Oliva, Z Zhao, S Gaffney, ...
Journal of Thoracic Oncology 12 (1), S435, 2017
2017
Mutational landscape of uterine and ovarian carcinosarcomas reveals new recurrently-mutated histone core genes as drivers of epithelial-mesenchymal transition
G Menderes, S Zhao, CL Schwab, S Lopez, JD Black, E Cocco, S Bellone, ...
Cancer Research 76 (14 Supplement), 135-135, 2016
2016
MP71-12 GENOMIC CHARACTERIZATION OF SARCOMATOID TRANSFORMATION IN CLEAR CELL RENAL CELL CARCINOMA
M Bi, S Zhao, M Merino, J Said, A Adeniran, C Nawaf, zuoquan Xie, ...
The Journal of Urology 195 (4S), e920-e920, 2016
2016
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