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Matthew Scarborough
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A genomic catalog of Earth’s microbiomes
S Nayfach, S Roux, R Seshadri, D Udwary, N Varghese, F Schulz, D Wu, ...
Nature biotechnology 39 (4), 499-509, 2021
5542021
Pilot plant demonstration of stable and efficient high rate biological nutrient removal with low dissolved oxygen conditions
NA Keene, SR Reusser, MJ Scarborough, AL Grooms, M Seib, ...
Water Research 121, 72-85, 2017
1052017
Increasing the economic value of lignocellulosic stillage through medium-chain fatty acid production
MJ Scarborough, G Lynch, M Dickson, M McGee, TJ Donohue, ...
Biotechnology for biofuels 11, 1-17, 2018
962018
Metatranscriptomic and thermodynamic insights into medium-chain fatty acid production using an anaerobic microbiome
MJ Scarborough, CE Lawson, JJ Hamilton, TJ Donohue, DR Noguera
mSystems 3 (6), e00221-18, 2018
722018
Fermentation of organic residues to beneficial chemicals: a review of medium-chain fatty acid production
P Stamatopoulou, J Malkowski, L Conrado, K Brown, M Scarborough
Processes 8 (12), 1571, 2020
472020
Medium-Chain Fatty Acid Synthesis by “Candidatus Weimeria bifida” gen. nov., sp. nov., and “Candidatus Pseudoramibacter fermentans” sp. nov
MJ Scarborough, KS Myers, TJ Donohue, DR Noguera
Applied and Environmental Microbiology 86 (3), e02242-19, 2020
40*2020
Combining genome-scale experimental and computational methods to identify essential genes in Rhodobacter sphaeroides
BT Burger, S Imam, MJ Scarborough, DR Noguera, TJ Donohue
MSystems 2 (3), 10.1128/msystems. 00015-17, 2017
392017
A supply chain framework for the analysis of the recovery of biogas and fatty acids from organic waste
Y Hu, M Scarborough, H Aguirre-Villegas, RA Larson, DR Noguera, ...
ACS sustainable chemistry & engineering 6 (5), 6211-6222, 2018
312018
Thousands of small, novel genes predicted in global phage genomes
BJ Fremin, AS Bhatt, NC Kyrpides, A Sengupta, A Sczyrba, AM da Silva, ...
Cell reports 39 (12), 2022
232022
Diagnosing and predicting mixed-culture fermentations with unicellular and guild-based metabolic models
MJ Scarborough, JJ Hamilton, EA Erb, TJ Donohue, DR Noguera
Msystems 5 (5), 10.1128/msystems. 00755-20, 2020
222020
Resilient soils for resilient farms: An integrative approach to assess, promote, and value soil health for small-and medium-size farms
DA Neher, JM Harris, CE Horner, MJ Scarborough, AR Badireddy, ...
Phytobiomes Journal 6 (3), 201-206, 2022
42022
Microbiomes for sustainable biomanufacturing
MJ Scarborough, CE Lawson, AC DeCola, IM Gois
Current Opinion in Microbiology 65, 8-14, 2022
42022
Residual Madness: Practical Challenges of Chlorinating Primary Effluent Wet Weather Flows
M Scarborough, M Arends, S Jeyanayagam, L Schimmoller
WEFTEC 2012, 2012
32012
Metagenome-assembled genomes from a microbiome grown in dairy manure hydrolysate
AT Ingle, NW Fortney, KS Myers, KA Walters, MJ Scarborough, ...
Microbiology Resource Announcements 11 (8), e00292-22, 2022
22022
Metagenomes and metagenome-assembled genomes from microbiomes metabolizing thin stillage from an ethanol biorefinery
NW Fortney, KS Myers, AT Ingle, KA Walters, MJ Scarborough, ...
Microbiology Resource Announcements 11 (8), e00290-22, 2022
22022
Metagenomes and metagenome-assembled genomes from microbial communities fermenting ultrafiltered milk permeate
KA Walters, KS Myers, H Wang, NW Fortney, AT Ingle, MJ Scarborough, ...
Microbiology Resource Announcements 11 (7), e00293-22, 2022
22022
Metagenome-assembled genomes from a microbiome converting xylose to medium-chain carboxylic acids
MJ Scarborough, KS Myers, NW Fortney, AT Ingle, TJ Donohue, ...
Microbiology Resource Announcements 11 (4), e01151-21, 2022
22022
Evaluation of acid-phase digestion as a pretreatment to enhance co-digestion of source separated organics and municipal sewage sludges
MD Seib, AJ Booton, MJ Scarborough, DR Noguera
Water Science and Technology 80 (7), 1257-1265, 2019
22019
Diverse electron carriers drive syntrophic interactions in an enriched anaerobic acetate-oxidizing consortium
EA McDaniel, M Scarborough, DG Mulat, X Lin, PS Sampara, HM Olson, ...
The ISME Journal 17 (12), 2326-2339, 2023
12023
Organics Recycling Tradeoffs: Biogas Potential and Microplastic Content of Mechanically Depackaged Food Waste
KK Porterfield, MJ Scarborough, ED Roy
ACS Sustainable Chemistry & Engineering 11 (28), 10422-10429, 2023
12023
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Articles 1–20