| Regulatory divergence in Drosophila revealed by mRNA-seq CJ McManus, JD Coolon, MO Duff, J Eipper-Mains, BR Graveley, ... Genome research 20 (6), 816-825, 2010 | 441 | 2010 |
| RNA structure and the mechanisms of alternative splicing CJ McManus, BR Graveley Current opinion in genetics & development 21 (4), 373-379, 2011 | 308 | 2011 |
| Ribosome profiling reveals post-transcriptional buffering of divergent gene expression in yeast CJ McManus, GE May, P Spealman, A Shteyman Genome research 24 (3), 422-430, 2014 | 231 | 2014 |
| Mod-seq: high-throughput sequencing for chemical probing of RNA structure J Talkish, G May, Y Lin, JL Woolford, CJ McManus Rna 20 (5), 713-720, 2014 | 211 | 2014 |
| Tempo and mode of regulatory evolution in Drosophila JD Coolon, CJ McManus, KR Stevenson, BR Graveley, PJ Wittkopp Genome research 24 (5), 797-808, 2014 | 176 | 2014 |
| Structural analyses of NEAT1 lncRNAs suggest long-range RNA interactions that may contribute to paraspeckle architecture Y Lin, BF Schmidt, MP Bruchez, CJ McManus Nucleic acids research 46 (7), 3742-3752, 2018 | 143 | 2018 |
| Global analysis of trans-splicing in Drosophila CJ McManus, MO Duff, J Eipper-Mains, BR Graveley Proceedings of the National Academy of Sciences 107 (29), 12975-12979, 2010 | 125 | 2010 |
| Next-generation analysis of gene expression regulation–comparing the roles of synthesis and degradation J McManus, Z Cheng, C Vogel Molecular BioSystems 11 (10), 2680-2689, 2015 | 104 | 2015 |
| DNA copy number evolution in Drosophila cell lines H Lee, CJ McManus, DY Cho, M Eaton, F Renda, MP Somma, L Cherbas, ... Genome biology 15, 1-20, 2014 | 94 | 2014 |
| Genome-wide analysis of the skeletogenic gene regulatory network of sea urchins K Rafiq, T Shashikant, CJ McManus, CA Ettensohn Development 141 (4), 950-961, 2014 | 92 | 2014 |
| Circuit diversification in a biofilm regulatory network MY Huang, CA Woolford, G May, CJ McManus, AP Mitchell PLoS pathogens 15 (5), e1007787, 2019 | 89 | 2019 |
| Conserved non-AUG uORFs revealed by a novel regression analysis of ribosome profiling data P Spealman, AW Naik, GE May, S Kuersten, L Freeberg, RF Murphy, ... Genome research 28 (2), 214-222, 2018 | 81 | 2018 |
| Competing RNA secondary structures are required for mutually exclusive splicing of the Dscam exon 6 cluster GE May, S Olson, CJ McManus, BR Graveley Rna 17 (2), 222-229, 2011 | 71 | 2011 |
| Genomic imprinting absent in Drosophila melanogaster adult females JD Coolon, KR Stevenson, CJ McManus, BR Graveley, PJ Wittkopp Cell reports 2 (1), 69-75, 2012 | 51 | 2012 |
| Impacts of uORF codon identity and position on translation regulation Y Lin, GE May, H Kready, L Nazzaro, M Mao, P Spealman, Y Creeger, ... Nucleic acids research 47 (17), 9358-9367, 2019 | 50 | 2019 |
| Effects of cocaine and withdrawal on the mouse nucleus accumbens transcriptome JE Eipper‐Mains, DD Kiraly, MO Duff, MJ Horowitz, CJ McManus, ... Genes, Brain and behavior 12 (1), 21-33, 2013 | 50 | 2013 |
| Roles of Candida albicans Mig1 and Mig2 in glucose repression, pathogenicity traits, and SNF1 essentiality K Lagree, CA Woolford, MY Huang, G May, CJ McManus, NV Solis, ... PLoS genetics 16 (1), e1008582, 2020 | 47 | 2020 |
| Evolution of splicing regulatory networks in Drosophila CJ McManus, JD Coolon, J Eipper-Mains, PJ Wittkopp, BR Graveley Genome research 24 (5), 786-796, 2014 | 43 | 2014 |
| Tales of diversity: Genomic and morphological characteristics of forty-six Arthrobacter phages KK Klyczek, JA Bonilla, D Jacobs-Sera, TL Adair, P Afram, KG Allen, ... PLoS One 12 (7), e0180517, 2017 | 39 | 2017 |
| Isoform-level ribosome occupancy estimation guided by transcript abundance with Ribomap H Wang, J McManus, C Kingsford Bioinformatics 32 (12), 1880-1882, 2016 | 38 | 2016 |
Gemma E MayCarnegie Mellon University在 andrew.cmu.edu 的电子邮件经过验证
