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Raphael Townshend
Raphael Townshend
Founder & CEO, Atomic AI
Verified email at cs.stanford.edu - Homepage
Title
Cited by
Cited by
Year
Learning from protein structure with geometric vector perceptrons
B Jing, S Eismann, P Suriana, RJL Townshend, R Dror
International Conference on Learning Representations, 2021
3312021
Geometric deep learning of RNA structure
RJL Townshend, S Eismann, AM Watkins, R Rangan, M Karelina, R Das, ...
Science 373 (6558), 1047-1051, 2021
2402021
Molecular mechanism of GPCR-mediated arrestin activation
NR Latorraca, JK Wang, B Bauer, RJL Townshend, SA Hollingsworth, ...
Nature 557 (7705), 452-456, 2018
1972018
End-to-end learning on 3d protein structure for interface prediction
RJL Townshend, R Bedi, PA Suriana, RO Dror
Neural Information Processing Systems, 2018
1172018
Atom3d: Tasks on molecules in three dimensions
RJL Townshend, M Vögele, P Suriana, A Derry, A Powers, Y Laloudakis, ...
arXiv preprint arXiv:2012.04035, 2020
1062020
How GPCR phosphorylation patterns orchestrate arrestin-mediated signaling
NR Latorraca, M Masureel, SA Hollingsworth, FM Heydenreich, ...
Cell 183 (7), 1813-1825. e18, 2020
1052020
Simple biochemical features underlie transcriptional activation domain diversity and dynamic, fuzzy binding to Mediator
AL Sanborn, BT Yeh, JT Feigerle, CV Hao, RJL Townshend, ...
Elife 10, e68068, 2021
942021
Hierarchical, rotation‐equivariant neural networks to select structural models of protein complexes
S Eismann, RJL Townshend, N Thomas, M Jagota, B Jing, RO Dror
Proteins: Structure, Function, and Bioinformatics 89 (5), 493-501, 2021
69*2021
User-driven geolocation of untagged desert imagery using digital elevation models
E Tzeng, A Zhai, M Clements, R Townshend, A Zakhor
Proceedings of the IEEE Conference on Computer Vision and Pattern …, 2013
342013
Protein model quality assessment using rotation-equivariant, hierarchical neural networks
S Eismann, P Suriana, B Jing, RJL Townshend, RO Dror
arXiv preprint arXiv:2011.13557, 2020
112020
Geometric prediction: Moving beyond scalars
RJL Townshend, B Townshend, S Eismann, RO Dror
arXiv preprint arXiv:2006.14163, 2020
82020
Gold nanoparticles and tilt pairs to assess protein flexibility by cryo-electron microscopy
M Jagota, RJL Townshend, LW Kang, DA Bushnell, RO Dror, ...
Ultramicroscopy 227, 113302, 2021
42021
Protein model quality assessment using rotation‐equivariant transformations on point clouds
S Eismann, P Suriana, B Jing, RJL Townshend, RO Dror
Proteins: Structure, Function, and Bioinformatics 91 (8), 1089-1096, 2023
12023
ATOM-1: A foundation model for RNA structure and function built on chemical mapping data
N Boyd, BM Anderson, B Townshend, R Chow, CJ Stephens, R Rangan, ...
bioRxiv, 2023.12. 13.571579, 2023
12023
Euclidean transformers for macromolecular structures: Lessons learned
DD Liu, L Melo, A Costa, M Vögele, RJL Townshend, RO Dror
2022 ICML Workshop on Computational Biology, 2022
12022
Methods, systems, and media method applying machine learning to chemical mapping data for rna tertiary structure prediction
RJL Townshend, SJ Eismann
US Patent App. 18/452,480, 2024
2024
Geometric deep learning of RNA structure (vol 379, eadg6616, 2023)
RJL Townshend
SCIENCE 380 (6649), 1022-1022, 2023
2023
Geometric deep learning of RNA structure (vol 373, pg 1047, 2021)
RJL Townshend
SCIENCE 379 (6630), 2023
2023
Geometric Learning of Biomolecular Structure
RJL Townshend
Stanford University, 2021
2021
Transferrable End-to-End Learning for Protein Interface Prediction
RJL Townshend, R Bedi, RO Dror
2018
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