| diaPASEF: parallel accumulation–serial fragmentation combined with data-independent acquisition F Meier, AD Brunner, M Frank, A Ha, I Bludau, E Voytik, ... Nature methods 17 (12), 1229-1236, 2020 | 426 | 2020 |
| Multi-omic measurements of heterogeneity in HeLa cells across laboratories Y Liu, Y Mi, T Mueller, S Kreibich, EG Williams, A Van Drogen, C Borel, ... Nature biotechnology 37 (3), 314-322, 2019 | 298 | 2019 |
| Complex‐centric proteome profiling by SEC‐SWATH‐MS M Heusel, I Bludau, G Rosenberger, R Hafen, M Frank, ... Molecular systems biology 15 (1), e8438, 2019 | 137 | 2019 |
| A global screen for assembly state changes of the mitotic proteome by SEC-SWATH-MS M Heusel, M Frank, M Köhler, S Amon, F Frommelt, G Rosenberger, ... Cell systems 10 (2), 133-155. e6, 2020 | 65 | 2020 |
| Systematic detection of functional proteoform groups from bottom-up proteomic datasets I Bludau, M Frank, C Dörig, Y Cai, M Heusel, G Rosenberger, P Picotti, ... Nature communications 12 (1), 3810, 2021 | 57 | 2021 |
| Isoform‐resolved correlation analysis between mRNA abundance regulation and protein level degradation B Salovska, H Zhu, T Gandhi, M Frank, W Li, G Rosenberger, C Wu, ... Molecular systems biology 16 (3), e9170, 2020 | 46 | 2020 |
| Complex-centric proteome profiling by SEC-SWATH-MS for the parallel detection of hundreds of protein complexes I Bludau, M Heusel, M Frank, G Rosenberger, R Hafen, ... Nature protocols, 1-47, 2020 | 42 | 2020 |
| Parallel accumulation–serial fragmentation combined with data-independent acquisition (diaPASEF): Bottom-up proteomics with near optimal ion usage F Meier, AD Brunner, M Frank, A Ha, E Voytik, S Kaspar-Schoenefeld, ... bioRxiv, 656207, 2019 | 32 | 2019 |
| McQ–An open-source multiplexed SARS-CoV-2 quantification platform SC Vonesch, D Bredikhin, N Dobrev, L Villacorta, R Kleinendorst, ... medRxiv, 2020.12. 02.20242628, 2020 | 3 | 2020 |
| Mobi-DIK (Ion Mobility DIA Analysis Kit): Targeted analysis software for diaPASEF data improves proteome coverage A Ha, M Frank, F Meier, AD Brunner, S Kaspar-Schoenefeld, S Koch, ... AMER SOC BIOCHEMISTRY MOLECULAR BIOLOGY INC, 2019 | | 2019 |
