A network representation of protein structures: implications for protein stability KV Brinda, S Vishveshwara Biophysical journal 89 (6), 4159-4170, 2005 | 457 | 2005 |
Protein structure: insights from graph theory S Vishveshwara, KV Brinda, N Kannan Journal of Theoretical and Computational Chemistry 1 (01), 187-211, 2002 | 236 | 2002 |
RCSB Protein Data Bank (RCSB. org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial … SK Burley, C Bhikadiya, C Bi, S Bittrich, H Chao, L Chen, PA Craig, ... Nucleic acids research 51 (D1), D488-D508, 2023 | 199 | 2023 |
Oligomeric protein structure networks: insights into protein-protein interactions KV Brinda, S Vishveshwara BMC bioinformatics 6, 1-15, 2005 | 133 | 2005 |
Dynamics of lysozyme structure network: probing the process of unfolding A Ghosh, KV Brinda, S Vishveshwara Biophysical journal 92 (7), 2523-2535, 2007 | 107 | 2007 |
RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D SK Burley, C Bhikadiya, C Bi, S Bittrich, L Chen, GV Crichlow, JM Duarte, ... Protein Science 31 (1), 187-208, 2022 | 106 | 2022 |
SOD1 phosphorylation by mTORC1 couples nutrient sensing and redox regulation CK Tsang, M Chen, X Cheng, Y Qi, Y Chen, I Das, X Li, B Vallat, LW Fu, ... Molecular cell 70 (3), 502-515. e8, 2018 | 101 | 2018 |
Determinants of quaternary association in legume lectins KV Brinda, N Mitra, A Surolia, S Vishveshwara Protein Science 13 (7), 1735-1749, 2004 | 93 | 2004 |
Development of a prototype system for archiving integrative/hybrid structure models of biological macromolecules B Vallat, B Webb, JD Westbrook, A Sali, HM Berman Structure 26 (6), 894-904. e2, 2018 | 92 | 2018 |
Insights into the quaternary association of proteins through structure graphs: a case study of lectins KV Brinda, A Surolia, S Vishveshwara Biochemical journal 391 (1), 1-15, 2005 | 73 | 2005 |
Analysis of homodimeric protein interfaces by graph-spectral methods KV Brinda, N Kannan, S Vishveshwara Protein engineering 15 (4), 265-277, 2002 | 73 | 2002 |
Federating structural models and data: outcomes from a workshop on archiving integrative structures HM Berman, PD Adams, AA Bonvin, SK Burley, B Carragher, W Chiu, ... Structure 27 (12), 1745-1759, 2019 | 47 | 2019 |
PDBx/mmCIF ecosystem: foundational semantic tools for structural biology JD Westbrook, JY Young, C Shao, Z Feng, V Guranovic, CL Lawson, ... Journal of molecular biology 434 (11), 167599, 2022 | 45 | 2022 |
Identification of domains and domain interface residues in multidomain proteins from graph spectral method RK Sistla, B KV, S Vishveshwara Proteins: Structure, Function, and Bioinformatics 59 (3), 616-626, 2005 | 44 | 2005 |
RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D SK Burley, C Bhikadiya, C Bi, S Bittrich, H Chao, L Chen, PA Craig, ... Protein Science 31 (12), e4482, 2022 | 37 | 2022 |
Protein data bank: a comprehensive review of 3D structure holdings and worldwide utilization by researchers, educators, and students SK Burley, HM Berman, JM Duarte, Z Feng, JW Flatt, BP Hudson, R Lowe, ... Biomolecules 12 (10), 1425, 2022 | 37 | 2022 |
Random network behaviour of protein structures KV Brinda, S Vishveshwara, S Vishveshwara Molecular Biosystems 6 (2), 391-398, 2010 | 34 | 2010 |
Building and assessing atomic models of proteins from structural templates: Learning and benchmarks BK Vallat, J Pillardy, P Májek, J Meller, T Blom, BQ Cao, R Elber Proteins: Structure, Function, and Bioinformatics 76 (4), 930-945, 2009 | 32 | 2009 |
A novel acquired exon 20 EGFR M766Q mutation in lung adenocarcinoma mediates osimertinib resistance but is sensitive to neratinib and poziotinib GM Castellano, J Aisner, SK Burley, B Vallat, AY Helena, SR Pine, ... Journal of thoracic oncology 14 (11), 1982-1988, 2019 | 29 | 2019 |
New system for archiving integrative structures B Vallat, B Webb, M Fayazi, S Voinea, H Tangmunarunkit, SJ Ganesan, ... Acta Crystallographica Section D: Structural Biology 77 (12), 1486-1496, 2021 | 28 | 2021 |