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Brinda Vallat
Brinda Vallat
Other namesBrinda KV, Brinda Kizhakke Vallat
Associate Research Professor, Rutgers University
Verified email at rcsb.org - Homepage
Title
Cited by
Cited by
Year
A network representation of protein structures: implications for protein stability
KV Brinda, S Vishveshwara
Biophysical journal 89 (6), 4159-4170, 2005
4572005
Protein structure: insights from graph theory
S Vishveshwara, KV Brinda, N Kannan
Journal of Theoretical and Computational Chemistry 1 (01), 187-211, 2002
2362002
RCSB Protein Data Bank (RCSB. org): delivery of experimentally-determined PDB structures alongside one million computed structure models of proteins from artificial …
SK Burley, C Bhikadiya, C Bi, S Bittrich, H Chao, L Chen, PA Craig, ...
Nucleic acids research 51 (D1), D488-D508, 2023
1992023
Oligomeric protein structure networks: insights into protein-protein interactions
KV Brinda, S Vishveshwara
BMC bioinformatics 6, 1-15, 2005
1332005
Dynamics of lysozyme structure network: probing the process of unfolding
A Ghosh, KV Brinda, S Vishveshwara
Biophysical journal 92 (7), 2523-2535, 2007
1072007
RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D
SK Burley, C Bhikadiya, C Bi, S Bittrich, L Chen, GV Crichlow, JM Duarte, ...
Protein Science 31 (1), 187-208, 2022
1062022
SOD1 phosphorylation by mTORC1 couples nutrient sensing and redox regulation
CK Tsang, M Chen, X Cheng, Y Qi, Y Chen, I Das, X Li, B Vallat, LW Fu, ...
Molecular cell 70 (3), 502-515. e8, 2018
1012018
Determinants of quaternary association in legume lectins
KV Brinda, N Mitra, A Surolia, S Vishveshwara
Protein Science 13 (7), 1735-1749, 2004
932004
Development of a prototype system for archiving integrative/hybrid structure models of biological macromolecules
B Vallat, B Webb, JD Westbrook, A Sali, HM Berman
Structure 26 (6), 894-904. e2, 2018
922018
Insights into the quaternary association of proteins through structure graphs: a case study of lectins
KV Brinda, A Surolia, S Vishveshwara
Biochemical journal 391 (1), 1-15, 2005
732005
Analysis of homodimeric protein interfaces by graph-spectral methods
KV Brinda, N Kannan, S Vishveshwara
Protein engineering 15 (4), 265-277, 2002
732002
Federating structural models and data: outcomes from a workshop on archiving integrative structures
HM Berman, PD Adams, AA Bonvin, SK Burley, B Carragher, W Chiu, ...
Structure 27 (12), 1745-1759, 2019
472019
PDBx/mmCIF ecosystem: foundational semantic tools for structural biology
JD Westbrook, JY Young, C Shao, Z Feng, V Guranovic, CL Lawson, ...
Journal of molecular biology 434 (11), 167599, 2022
452022
Identification of domains and domain interface residues in multidomain proteins from graph spectral method
RK Sistla, B KV, S Vishveshwara
Proteins: Structure, Function, and Bioinformatics 59 (3), 616-626, 2005
442005
RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D
SK Burley, C Bhikadiya, C Bi, S Bittrich, H Chao, L Chen, PA Craig, ...
Protein Science 31 (12), e4482, 2022
372022
Protein data bank: a comprehensive review of 3D structure holdings and worldwide utilization by researchers, educators, and students
SK Burley, HM Berman, JM Duarte, Z Feng, JW Flatt, BP Hudson, R Lowe, ...
Biomolecules 12 (10), 1425, 2022
372022
Random network behaviour of protein structures
KV Brinda, S Vishveshwara, S Vishveshwara
Molecular Biosystems 6 (2), 391-398, 2010
342010
Building and assessing atomic models of proteins from structural templates: Learning and benchmarks
BK Vallat, J Pillardy, P Májek, J Meller, T Blom, BQ Cao, R Elber
Proteins: Structure, Function, and Bioinformatics 76 (4), 930-945, 2009
322009
A novel acquired exon 20 EGFR M766Q mutation in lung adenocarcinoma mediates osimertinib resistance but is sensitive to neratinib and poziotinib
GM Castellano, J Aisner, SK Burley, B Vallat, AY Helena, SR Pine, ...
Journal of thoracic oncology 14 (11), 1982-1988, 2019
292019
New system for archiving integrative structures
B Vallat, B Webb, M Fayazi, S Voinea, H Tangmunarunkit, SJ Ganesan, ...
Acta Crystallographica Section D: Structural Biology 77 (12), 1486-1496, 2021
282021
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