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Weizhi Song
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A genomic view of the microbiome of coral reef demosponges
SJ Robbins, W Song, JP Engelberts, B Glasl, BM Slaby, J Boyd, ...
The ISME journal 15 (6), 1641-1654, 2021
902021
Binning_refiner: improving genome bins through the combination of different binning programs
WZ Song, T Thomas
Bioinformatics 33 (12), 1873-1875, 2017
842017
MetaCHIP: community-level horizontal gene transfer identification through the combination of best-match and phylogenetic approaches
W Song, B Wemheuer, S Zhang, K Steensen, T Thomas
Microbiome 7, 1-14, 2019
772019
Novel Chloroflexi genomes from the deepest ocean reveal metabolic strategies for the adaptation to deep-sea habitats
R Liu, X Wei, W Song, L Wang, J Cao, J Wu, T Thomas, T Jin, Z Wang, ...
Microbiome 10 (1), 1-17, 2022
422022
Comparative Genomics Reveals Ecological and Evolutionary Insights into Sponge-Associated Thaumarchaeota
S Zhang, W Song, B Wemheuer, J Reveillaud, N Webster, T Thomas
Msystems 4 (4), 10.1128/msystems. 00288-19, 2019
382019
Contribution of horizontal gene transfer to the functionality of microbial biofilm on a macroalgae
W Song, B Wemheuer, PD Steinberg, EM Marzinelli, T Thomas
The ISME Journal 15 (3), 807-817, 2021
322021
Characterization and expression analysis of three cold shock protein (CSP) genes under different stress conditions in the Antarctic bacterium Psychrobacter sp. G
W Song, X Lin, X Huang
Polar biology 35, 1515-1524, 2012
252012
Functional diversity of microbial communities in inactive seafloor sulfide deposits
X Dong, C Zhang, W Li, S Weng, W Song, J Li, Y Wang
FEMS Microbiology Ecology 97 (8), fiab108, 2021
182021
Carbon fixation pathways across the bacterial and archaeal tree of life
AN Garritano, W Song, T Thomas
PNAS nexus 1 (5), pgac226, 2022
162022
Complete genome sequences of pooled genomic DNA from 10 marine bacteria using PacBio long-read sequencing
W Song, T Thomas, RJ Edwards
Marine genomics 48, 100687, 2019
162019
Complete Genome Sequence of Antarctic Bacterium Psychrobacter sp. Strain G
S Che, L Song, W Song, M Yang, G Liu, X Lin
Genome Announcements 1 (5), 10.1128/genomea. 00725-13, 2013
162013
Comparative metabolomic analysis reveals shared and unique chemical interactions in sponge holobionts
S Zhang, W Song, LF Nothias, SP Couvillion, N Webster, T Thomas
Microbiome 10 (1), 1-14, 2022
152022
Response of Heat-Shock Protein (HSP) Genes to Temperature and Salinity Stress in the Antarctic Psychrotrophic Bacterium Psychrobacter sp. G
S Che, W Song, X Lin
Current microbiology 67, 601-608, 2013
132013
MarkerMAG: linking metagenome-assembled genomes (MAGs) with 16S rRNA marker genes using paired-end short reads
W Song, S Zhang, T Thomas
Bioinformatics 38 (15), 3684-3688, 2022
122022
HgtSIM: a simulator for horizontal gene transfer (HGT) in microbial communities
W Song, K Steensen, T Thomas
PeerJ 5, e4015, 2017
112017
Phenotypic divergence of thermotolerance: Molecular basis and cold adaptive evolution related to intrinsic DNA flexibility of glacier‐inhabiting Cryobacterium strains
Q Liu, WZ Song, YG Zhou, XZ Dong, YH Xin
Environmental microbiology 22 (4), 1409-1420, 2020
102020
Comparative genomics analysis of five Psychrobacter strains isolated from world-wide habitats reveal high intra-genus variations
S Zhang, W Song, M Yu, X Lin
Extremophiles 21, 581-589, 2017
102017
Bacterial diversity in Arctic marine sediment determined by culture-dependent and-independent approaches
LIN Xuezheng, W Zhen, CHE Shuai, S Weizhi, YI Dan
极地研究 25 (1-English), 46-53, 2014
42014
Identification of Regulatory Sequences and Expression Analysis of OmpR Gene Under Different Stress Conditions in the Antarctic Bacterium Psychrobacter sp. G
W Song, X Lin, S Che
Current microbiology 66, 259-265, 2013
32013
Genomic analyses reveal a low-temperature adapted clade in Halorubrum, a widespread haloarchaeon across global hypersaline environments
L Chen, T Hong, Z Wu, W Song, SX Chen, Y Liu, L Shen
BMC genomics 24 (1), 508, 2023
12023
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Articles 1–20