| Assessing computational methods for predicting protein stability upon mutation: good on average but not in the details V Potapov, M Cohen, G Schreiber Protein engineering, design & selection 22 (9), 553-560, 2009 | 394 | 2009 |
| Examining sources of error in PCR by single-molecule sequencing V Potapov, JL Ong PloS one 12 (1), e0169774, 2017 | 342 | 2017 |
| Comprehensive profiling of four base overhang ligation fidelity by T4 DNA ligase and application to DNA assembly V Potapov, JL Ong, RB Kucera, BW Langhorst, K Bilotti, JM Pryor, ... ACS synthetic biology 7 (11), 2665-2674, 2018 | 157 | 2018 |
| Community-wide assessment of protein-interface modeling suggests improvements to design methodology SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ... Journal of molecular biology 414 (2), 289-302, 2011 | 157 | 2011 |
| The limit of accuracy of protein modeling: influence of crystal packing on protein structure E Eyal, S Gerzon, V Potapov, M Edelman, V Sobolev Journal of molecular biology 351 (2), 431-442, 2005 | 156 | 2005 |
| SPACE: a suite of tools for protein structure prediction and analysis based on complementarity and environment V Sobolev, E Eyal, S Gerzon, V Potapov, M Babor, J Prilusky, M Edelman Nucleic acids research 33 (suppl_2), W39-W43, 2005 | 120 | 2005 |
| Base modifications affecting RNA polymerase and reverse transcriptase fidelity V Potapov, X Fu, N Dai, IR Corrêa Jr, NA Tanner, JL Ong Nucleic acids research 46 (11), 5753-5763, 2018 | 103 | 2018 |
| Enabling one-pot Golden Gate assemblies of unprecedented complexity using data-optimized assembly design JM Pryor, V Potapov, RB Kucera, K Bilotti, EJ Cantor, GJS Lohman PLoS One 15 (9), e0238592, 2020 | 61 | 2020 |
| Data-driven prediction and design of bZIP coiled-coil interactions V Potapov, JB Kaplan, AE Keating PLoS computational biology 11 (2), e1004046, 2015 | 60 | 2015 |
| Computational redesign of a protein–protein interface for high affinity and binding specificity using modular architecture and naturally occurring template fragments V Potapov, D Reichmann, R Abramovich, D Filchtinski, N Zohar, ... Journal of molecular biology 384 (1), 109-119, 2008 | 55 | 2008 |
| Protein–protein recognition: juxtaposition of domain and interface cores in immunoglobulins and other sandwich-like proteins V Potapov, V Sobolev, M Edelman, A Kister, I Gelfand Journal of molecular biology 342 (2), 665-679, 2004 | 41 | 2004 |
| A single-molecule sequencing assay for the comprehensive profiling of T4 DNA ligase fidelity and bias during DNA end-joining V Potapov, JL Ong, BW Langhorst, K Bilotti, D Cahoon, B Canton, ... Nucleic Acids Research 46 (13), e79-e79, 2018 | 36 | 2018 |
| Rapid 40 kb genome construction from 52 parts through data-optimized assembly design JM Pryor, V Potapov, K Bilotti, N Pokhrel, GJS Lohman ACS Synthetic Biology 11 (6), 2036-2042, 2022 | 35 | 2022 |
| Therminator DNA polymerase: modified nucleotides and unnatural substrates AF Gardner, KM Jackson, MM Boyle, JA Buss, V Potapov, AM Gehring, ... Frontiers in Molecular Biosciences 6, 28, 2019 | 35 | 2019 |
| Four distances between pairs of amino acids provide a precise description of their interaction M Cohen, V Potapov, G Schreiber PLoS computational biology 5 (8), e1000470, 2009 | 33 | 2009 |
| Protein structure modelling and evaluation based on a 4-distance description of side-chain interactions V Potapov, M Cohen, Y Inbar, G Schreiber Bmc Bioinformatics 11, 1-17, 2010 | 27 | 2010 |
| RADAR-seq: A RAre DAmage and Repair sequencing method for detecting DNA damage on a genome-wide scale KM Zatopek, V Potapov, LL Maduzia, E Alpaslan, L Chen, TC Evans Jr, ... DNA repair 80, 36-44, 2019 | 21 | 2019 |
| A barcoding strategy enabling higher-throughput library screening by microscopy R Chen, HS Rishi, V Potapov, MR Yamada, VJ Yeh, T Chow, CL Cheung, ... ACS synthetic biology 4 (11), 1205-1216, 2015 | 21 | 2015 |
| Pol V-mediated translesion synthesis elicits localized untargeted mutagenesis during post-replicative gap repair A Isogawa, JL Ong, V Potapov, RP Fuchs, S Fujii Cell reports 24 (5), 1290-1300, 2018 | 19 | 2018 |
| N1-methyl-pseudouridine is incorporated with higher fidelity than pseudouridine in synthetic RNAs TH Chen, V Potapov, N Dai, JL Ong, B Roy Scientific Reports 12 (1), 13017, 2022 | 15 | 2022 |
marvin edelmanweizmann institute of scienceVerified email at weizmann.ac.il
