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Joanna Zyla
Joanna Zyla
PhD, Departament of Data Science and Engineering at Silesian University of Technology
Verified email at polsl.pl
Title
Cited by
Cited by
Year
Metabolite changes in blood predict the onset of tuberculosis
J Weiner 3rd, J Maertzdorf, JS Sutherland, FJ Duffy, E Thompson, ...
Nature communications 9 (1), 5208, 2018
1362018
Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms
J Zyla, M Marczyk, T Domaszewska, SHE Kaufmann, J Polanska, ...
Bioinformatics 35 (24), 5146-5154, 2019
1112019
Increased risk of severe clinical course of COVID-19 in carriers of HLA-C* 04: 01
J Weiner, P Suwalski, M Holtgrewe, A Rakitko, C Thibeault, M Mueller, ...
EClinicalMedicine 40, 2021
712021
Ranking metrics in gene set enrichment analysis: do they matter?
J Zyla, M Marczyk, J Weiner, J Polanska
BMC bioinformatics 18, 1-12, 2017
612017
Cellular stress promotes NOD1/2‐dependent inflammation via the endogenous metabolite sphingosine‐1‐phosphate
G Pei, J Zyla, L He, P Moura‐Alves, H Steinle, P Saikali, L Lozza, ...
The EMBO journal 40 (13), e106272, 2021
472021
Innate-like Gene Expression of Lung-Resident Memory CD8+ T Cells during Experimental Human Influenza: A Clinical Study
S Paterson, S Kar, SK Ung, Z Gardener, E Bergstrom, S Ascough, ...
American journal of respiratory and critical care medicine 204 (7), 826-841, 2021
162021
The lipid composition of serum-derived small extracellular vesicles in participants of a lung cancer screening study
M Smolarz, A Kurczyk, K Jelonek, J Żyła, Ł Mielańczyk, M Sitkiewicz, ...
Cancers 13 (14), 3414, 2021
162021
Kras mutations and PU.1 promoter methylation are new pathways in murine radiation-induced AML
G O’Brien, L Cruz-Garcia, J Zyla, N Brown, R Finnon, J Polanska, C Badie
Carcinogenesis 41 (8), 1104-1112, 2020
162020
Serum metabolite profiles in participants of lung cancer screening study; comparison of two independent cohorts
P Widłak, K Jelonek, A Kurczyk, J Żyła, M Sitkiewicz, E Bottoni, ...
Cancers 13 (11), 2714, 2021
142021
Screening support system based on patient survey data—Case study on classification of initial, locally collected COVID-19 data
J Henzel, J Tobiasz, M Kozielski, M Bach, P Foszner, A Gruca, M Kania, ...
Applied Sciences 11 (22), 10790, 2021
12*2021
Combining CDKN1A gene expression and genome-wide SNPs in a twin cohort to gain insight into the heritability of individual radiosensitivity
J Zyla, S Kabacik, G O’Brien, S Wakil, N Al-Harbi, J Kaprio, C Badie, ...
Functional & integrative genomics 19, 575-585, 2019
122019
Platelets restrict the oxidative burst in phagocytes and facilitate primary progressive tuberculosis
L Scheuermann, G Pei, T Domaszewska, J Zyla, D Oberbeck-Müller, ...
American Journal of Respiratory and Critical Care Medicine 202 (5), 730-744, 2020
112020
Weaker protection against tuberculosis in BCG-vaccinated male 129 S2 mice compared to females
NE Nieuwenhuizen, J Zyla, U Zedler, S Bandermann, UA Abed, ...
Vaccine 39 (50), 7253-7264, 2021
102021
Symptom-based early-stage differentiation between SARS-CoV-2 versus other respiratory tract infections—Upper Silesia pilot study
J Mika, J Tobiasz, J Zyla, A Papiez, M Bach, A Werner, M Kozielski, ...
Scientific reports 11 (1), 13580, 2021
72021
Sensitivity, specificity and prioritization of gene set analysis when applying different ranking metrics
J Zyla, M Marczyk, J Polanska
10th International Conference on Practical Applications of Computational …, 2016
72016
Seeking genetic signature of radiosensitivity-a novel method for data analysis in case of small sample sizes
J Zyla, P Finnon, R Bulman, S Bouffler, C Badie, J Polanska
Theoretical Biology and Medical Modelling 11, 1-16, 2014
62014
Importance of SNP dependency correction and association integration for gene set analysis in genome-wide association studies
M Marczyk, A Macioszek, J Tobiasz, J Polanska, J Zyla
Frontiers in Genetics 12, 767358, 2021
52021
Gene set enrichment analysis reveals individual variability in host responses in tuberculosis patients
T Domaszewska, J Zyla, R Otto, SHE Kaufmann, J Weiner
Frontiers in Immunology 12, 694680, 2021
52021
Reproducibility of finding enriched gene sets in biological data analysis
J Zyla, M Marczyk, J Polanska
11th International Conference on Practical Applications of Computational …, 2017
42017
Modelling of Genetic Interactions in GWAS Reveals More Complex Relations between Genotype and Phenotype.
J Zyla, C Badie, G Alsbeih, J Polanska
BIOINFORMATICS, 204-208, 2014
42014
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Articles 1–20