Alfonso Valencia - Google Scholar Citations

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	All	Since 2013
Citations	43457	19791
h-index	99	69
i10-index	326	238

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Co-authors

Martin Krallinger*Head of Biological Text Mining Unit, Spanish National Cancer Research Centre (CNIO)Verified email at cnio.es
Chris SanderDana-Farber Cancer Institute, Harvard Medical School, Memorial Sloan Kettering Cancer CenterVerified email at sanderlab.org
David JuanInstitut de Biologia Evolutiva (UPF-CSIC)Verified email at upf.edu
Florian LeitnerDatacatalytics SL, IE UniversityVerified email at datacatalytics.com
Christos OuzounisCERTH, Thessalonica, GreeceVerified email at certh.gr
Luis Sanchez-PulidoSenior Investigator Scientist IGMM HG-MRC University of EdinburghVerified email at igmm.ed.ac.uk
Miguel AndradeJohannes-Gutenberg University in MainzVerified email at uni-mainz.de
Ana Maria Rojas MendozaGroup Leader, Bioinformatics and Computational Biology, IBIS-HUVR-CSICVerified email at us.es
Peer BorkEMBLVerified email at embl.de
Iakes EzkurdiaSpanish National Cardiovascular Research Center CNICVerified email at cnic.es
Burkhard RostProfessor of Computer Science & Computational Biology & Bioinformatics, TUM, MunichVerified email at in.tum.de
David G PisanoHead of Health Analytics, SanitasVerified email at sanitas.es
Tirso PonsResearcher, CNB-CSICVerified email at cnb.csic.es
Federico AbascalSomatic Evolution, Wellcome Trust Sanger InstituteVerified email at sanger.ac.uk
Daniel RicoInstitute of Cellular Medicine, Newcastle University, UKVerified email at newcastle.ac.uk
Miguel VazquezVerified email at bsc.es
Paulino Gomez-PuertasCientífico Titular CSIC. Centro de Biología Molecular "Severo Ochoa".Verified email at cbm.csic.es
Rita CasadioFull Professor of Biochemistry, University of BolognaVerified email at unibo.it
Jose RodriguezSpanish National Bioinformatics Institute (INB), CNIOVerified email at cnio.es
ENRIQUE CARRILLO DE SANTA PAUIMDEA Food InstituteVerified email at imdea.org

Alfonso Valencia

ICREA Professor. Barcelona Supercomputing Center.

Verified email at bsc.es - Homepage

computational biology bioinformatics cancer genomics text mining protein evolution.


Title	Cited by	Year
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project ENCODE Project Consortium Nature 447 (7146), 799, 2007	4528	2007
GENCODE: the reference human genome annotation for The ENCODE Project J Harrow, A Frankish, JM Gonzalez, E Tapanari, M Diekhans, ... Genome research 22 (9), 1760-1774, 2012	1920	2012
International network of cancer genome projects International Cancer Genome Consortium Nature 464 (7291), 993, 2010	1240	2010
Whole-genome sequencing identifies recurrent mutations in chronic lymphocytic leukaemia XS Puente, M Pinyol, V Quesada, L Conde, GR Ordóñez, N Villamor, ... Nature 475 (7354), 101, 2011	1173	2011
A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS Biology 9 (4), e1001046, 2011	1022	2011
An ATPase domain common to prokaryotic cell cycle proteins, sugar kinases, actin, and hsp70 heat shock proteins. P Bork, C Sander, A Valencia Proceedings of the National Academy of Sciences 89 (16), 7290-7294, 1992	874	1992
IntAct: an open source molecular interaction database H Hermjakob, L Montecchi‐Palazzi, C Lewington, S Mudali, S Kerrien, ... Nucleic acids research 32 (suppl_1), D452-D455, 2004	828	2004
Correlated mutations and residue contacts in proteins U Göbel, C Sander, R Schneider, A Valencia Proteins: Structure, Function, and Bioinformatics 18 (4), 309-317, 1994	790	1994
Exome sequencing identifies recurrent mutations of the splicing factor SF3B1 gene in chronic lymphocytic leukemia V Quesada, L Conde, N Villamor, GR Ordóñez, P Jares, L Bassaganyas, ... Nature genetics 44 (1), 47, 2012	737	2012
A hierarchical unsupervised growing neural network for clustering gene expression patterns J Herrero, A Valencia, J Dopazo Bioinformatics 17 (2), 126-136, 2001	675	2001
The ras protein family: evolutionary tree and role of conserved amino acids A Valencia, P Chardin, A Wittinghofer, C Sander Biochemistry 30 (19), 4637-4648, 1991	602	1991
Automatic extraction of biological information from scientific text: protein-protein interactions. C Blaschke, MA Andrade, CA Ouzounis, A Valencia Ismb 7, 60-67, 1999	593	1999
A gene network for navigating the literature R Hoffmann, A Valencia Nature genetics 36 (7), 664, 2004	577	2004
A gene network for navigating the literature R Hoffmann, A Valencia Nature genetics 36 (7), 664, 2004	577	2004
Correlated mutations contain information about protein-protein interaction 1 F Pazos, M Helmer-Citterich, G Ausiello, A Valencia Journal of molecular biology 271 (4), 511-523, 1997	577	1997
Overview of BioCreAtIvE: critical assessment of information extraction for biology L Hirschman, A Yeh, C Blaschke, A Valencia BMC bioinformatics 6 (1), S1, 2005	534	2005
Similarity of phylogenetic trees as indicator of protein–protein interaction F Pazos, A Valencia Protein engineering 14 (9), 609-614, 2001	526	2001
Practical limits of function prediction D Devos, A Valencia Proteins: Structure, Function, and Bioinformatics 41 (1), 98-107, 2000	508	2000
Distinct DNA methylomes of newborns and centenarians H Heyn, N Li, HJ Ferreira, S Moran, DG Pisano, A Gomez, J Diez, ... Proceedings of the National Academy of Sciences 109 (26), 10522-10527, 2012	484	2012
Reductive genome evolution in Buchnera aphidicola RCHJ van Ham, J Kamerbeek, C Palacios, C Rausell, F Abascal, ... Proceedings of the National Academy of Sciences 100 (2), 581-586, 2003	460	2003

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