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Erik Nordquist
Erik Nordquist
Verified email at rx.umaryland.edu - Homepage
Title
Cited by
Cited by
Year
Accelerating the generalized born with molecular volume and solvent accessible surface area implicit solvent model using graphics processing units
X Gong, M Chiricotto, X Liu, E Nordquist, M Feig, CL Brooks III, J Chen
Journal of computational chemistry 41 (8), 830-838, 2020
142020
Machine learning generation of dynamic protein conformational ensembles
LE Zheng, S Barethiya, E Nordquist, J Chen
Molecules 28 (10), 4047, 2023
92023
Physics-based modeling provides predictive understanding of selectively promiscuous substrate binding by Hsp70 chaperones
EB Nordquist, CA English, EM Clerico, W Sherman, LM Gierasch, J Chen
PLOS Computational Biology 17 (11), e1009567, 2021
82021
Inner pore hydration free energy controls the activation of big potassium channels
EB Nordquist, Z Jia, J Chen
Biophysical Journal 122 (7), 1158-1167, 2023
72023
Computationally-aided modeling of Hsp70–client interactions: past, present, and future
EB Nordquist, EM Clerico, J Chen, LM Gierasch
The Journal of Physical Chemistry B 126 (36), 6780-6791, 2022
32022
Using metadynamics to explore the free energy of dewetting in biologically relevant nanopores
EB Nordquist, SA Schultz, J Chen
The Journal of Physical Chemistry B 126 (34), 6428-6437, 2022
32022
Incorporating physics to overcome data scarcity in predictive modeling of protein function: A case study of BK channels
E Nordquist, G Zhang, S Barethiya, N Ji, KM White, L Han, Z Jia, J Shi, ...
PLOS Computational Biology 19 (9), e1011460, 2023
12023
Combined physics-and machine-learning-based method to identify druggable binding sites using SILCS-Hotspots
E Nordquist, M Zhao, A Kumar, A MacKerell
2024
Computational mapping of allosteric modulators of the BK channel: SILCS in large systems
EB Nordquist, M Zhao, W Yu, FT Horrigan, AD MacKerell
Biophysical Journal 123 (3), 253a, 2024
2024
A predictive model of voltage gating of BK channels via physical modeling and machine learning
EB Nordquist, ZG Jia, J Chen
Biophysical Journal 122 (3), 388a, 2023
2023
Free energy of hydrophobic dewetting in gating of BK channels
EB Nordquist, ZG Jia, J Chen
Biophysical Journal 121 (3), 500a, 2022
2022
Hydrophobic dewetting in ion channel-like nanopores
S Schultz, E Nordquist, J Chen
Biophysical Journal 121 (3), 388a, 2022
2022
Accelerating GBMV2/SA Implicit Solvent Using Graphics Processing Units 2
X Gong, M Chiricotto, X Liu, E Nordquist, M Feig, CL Brooks III, J Chen
methodology 43, 44, 0
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