| Simulations of sequence evolution: how (un) realistic they are and why J Trost, J Haag, D Höhler, L Jacob, A Stamatakis, B Boussau Molecular Biology and Evolution 41 (1), msad277, 2024 | 3 | 2024 |
| Neural Networks beyond explainability: Selective inference for sequence motifs A Villié, P Veber, Y De Castro, L Jacob arXiv preprint arXiv:2212.12542, 2022 | 1 | 2022 |
| Mycobacterium tuberculosis genetic features associated with pulmonary tuberculosis severity C Genestet, G Refrégier, E Hodille, R Zein-Eddine, A Le Meur, F Hak, ... International Journal of Infectious Diseases 125, 74-83, 2022 | 8 | 2022 |
| CALDERA: finding all significant de Bruijn subgraphs for bacterial GWAS H Roux de Bézieux, L Lima, F Perraudeau, A Mary, S Dudoit, L Jacob Bioinformatics 38 (Supplement_1), i36-i44, 2022 | 7 | 2022 |
| Phyloformer: towards fast and accurate phylogeny estimation with self-attention networks L Nesterenko, B Boussau, L Jacob bioRxiv, 2022.06. 24.496975, 2022 | 9 | 2022 |
| Within-host genetic micro-diversity of Mycobacterium tuberculosis and the link with tuberculosis disease features C Genestet, E Hodille, F Massol, G Refrégier, A Barbry, E Westeel, G Lina, ... bioRxiv, 2021.04. 07.438754, 2021 | 1 | 2021 |
| Convolutional kernel networks for graph-structured data D Chen, L Jacob, J Mairal International Conference on Machine Learning, 1576-1586, 2020 | 59 | 2020 |
| Controlling technical variation amongst 6693 patient microarrays of the randomized MINDACT trial L Jacob, A Witteveen, I Beumer, L Delahaye, D Wehkamp, ... Communications biology 3 (1), 397, 2020 | 9 | 2020 |
| Niche specialization and spread of Staphylococcus capitis involved in neonatal sepsis T Wirth, M Bergot, JP Rasigade, B Pichon, M Barbier, P Martins-Simoes, ... Nature Microbiology 5 (5), 735-745, 2020 | 42 | 2020 |
| PEPA test: fast and powerful differential analysis from relative quantitative proteomics data using shared peptides L Jacob, F Combes, T Burger Biostatistics 20 (4), 632-647, 2019 | 6 | 2019 |
| Biological sequence modeling with convolutional kernel networks D Chen, L Jacob, J Mairal Bioinformatics 35 (18), 3294-3302, 2019 | 33* | 2019 |
| Hormonal pleiotropy and the evolution of allocation trade-offs S Bourg, L Jacob, F Menu, E Rajon Evolution 73 (4), 661-674, 2019 | 15 | 2019 |
| Recurrent kernel networks D Chen, L Jacob, J Mairal Advances in Neural Information Processing Systems 32, 2019 | 21 | 2019 |
| A fast and agnostic method for bacterial genome-wide association studies: bridging the gap between kmers and genetic events M Jaillard, L Lima, M Tournoud, P Mahé, A van Belkum, V Lacroix, ... PLOS Genetics 14 (11), 1-28, 2018 | 177 | 2018 |
| The healthy ageing gene expression signature for Alzheimer’s disease diagnosis: a random sampling perspective L Jacob, TP Speed Genome biology 19 (1), 97, 2018 | 10 | 2018 |
| OnAge: Test of between-group differences in the onset of senescence L Jacob, F Douhard, JF Lemaıtre, JM Gaillard, A Siberchicot | 1 | 2017 |
| Immunosenescence patterns differ between populations but not between sexes in a long-lived mammal L Cheynel, JF Lemaître, JM Gaillard, B Rey, G Bourgoin, H Ferté, M Jégo, ... Scientific reports 7 (1), 1-11, 2017 | 55 | 2017 |
| The cost of growing large: Costs of post‐weaning growth on body mass senescence in a wild mammal F Douhard, JM Gaillard, M Pellerin, L Jacob, JF Lemaître Oikos 126 (9), 1329-1338, 2017 | 46 | 2017 |
| How evolution draws trade-offs S Bourg, L Jacob, F Menu, E Rajon BioRxiv, 169904, 2017 | 5 | 2017 |
| Representing genetic determinants in bacterial GWAS with compacted De Bruijn graphs M Jaillard, M Tournoud, L Lima, V Lacroix, JB Veyrieras, L Jacob bioRxiv, 113563, 2017 | 10 | 2017 |
Jean-Philippe VertOwkin / PSL UniversityVerified email at owkin.com
