| Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4 H Rohde, J Qin, Y Cui, D Li, NJ Loman, M Hentschke, W Chen, F Pu, ... New England Journal of Medicine 365 (8), 718-724, 2011 | 497 | 2011 |
| Metagenomic analysis of milk of healthy and mastitis-suffering women E Jiménez, J de Andrés, M Manrique, P Pareja-Tobes, R Tobes, ... Journal of Human Lactation 31 (3), 406-415, 2015 | 263 | 2015 |
| Genomic analysis of the emergence and evolution of multidrug resistance during a Klebsiella pneumoniae outbreak including carbapenem and colistin resistance E López-Camacho, R Gómez-Gil, R Tobes, M Manrique, M Lorenzo, ... Journal of Antimicrobial Chemotherapy 69 (3), 632-636, 2014 | 84 | 2014 |
| ExtraTrain: a database of Extragenic regions and Transcriptional information in prokaryotic organisms E Pareja, P Pareja-Tobes, M Manrique, E Pareja-Tobes, J Bonal, R Tobes BMC microbiology 6 (1), 29, 2006 | 74 | 2006 |
| BG7: a new approach for bacterial genome annotation designed for next generation sequencing data P Pareja-Tobes, M Manrique, E Pareja-Tobes, E Pareja, R Tobes PloS one 7 (11), e49239, 2012 | 61 | 2012 |
| Normal mutation rate variants arise in a Mutator (Mut S) Escherichia coli population MC Turrientes, F Baquero, BR Levin, JL Martínez, A Ripoll, ... PloS one 8 (9), e72963, 2013 | 43 | 2013 |
| A systems biology approach to the characterization of stress response in Dermacentor reticulatus tick unfed larvae M Villar, M Popara, N Ayllon, IGF de Mera, L Mateos-Hernandez, ... PLoS One 9 (2), e89564, 2014 | 39 | 2014 |
| Bio4j: a high-performance cloud-enabled graph-based data platform P Pareja-Tobes, R Tobes, M Manrique, E Pareja, E Pareja-Tobes BioRxiv, 016758, 2015 | 37 | 2015 |
| Comparative Genomics of Field Isolates of Mycobacterium bovis and M. caprae Provides Evidence for Possible Correlates with Bacterial Viability and Virulence J de la Fuente, I Diez-Delgado, M Contreras, J Vicente, A Cabezas-Cruz, ... PLoS neglected tropical diseases 9 (11), e0004232, 2015 | 32 | 2015 |
| In vivo attenuation and genetic evolution of a ST247-SCCmecI MRSA clone after 13 years of pathogenic bronchopulmonary colonization in a patient with cystic … E López-Collazo, T Jurado, J de Dios Caballero, M Pérez-Vázquez, ... Mucosal immunology 8 (2), 362-371, 2015 | 23 | 2015 |
| Complete genome sequences of isolates of Enterococcus faecium sequence type 117, a globally disseminated multidrug-resistant clone AP Tedim, VF Lanza, M Manrique, E Pareja, P Ruiz-Garbajosa, R Cantón, ... Genome Announcements 5 (13), 2017 | 21 | 2017 |
| Early OXA-48-Producing Enterobacterales Isolates Recovered in a Spanish Hospital Reveal a Complex Introduction Dominated by Sequence Type 11 (ST11) and ST405 Klebsiella … D Gijón, AP Tedim, A Valverde, I Rodríguez, MI Morosini, TM Coque, ... Msphere 5 (2), 2020 | 18 | 2020 |
| Complete genome sequence of Ehrlichia mineirensis, a novel organism closely related to Ehrlichia canis with a new host association A Cabezas-Cruz, E Zweygarth, M Broniszweska, LMF Passos, ... Genome announcements 3 (1), 2015 | 16 | 2015 |
| Complete genome sequences of field isolates of Mycobacterium bovis and Mycobacterium caprae J De La Fuente, I Díez-Delgado, M Contreras, J Vicente, A Cabezas-Cruz, ... Genome announcements 3 (3), 2015 | 9 | 2015 |
| Gene calling and bacterial genome annotation with BG7 R Tobes, P Pareja-Tobes, M Manrique, E Pareja-Tobes, E Kovach, ... Bacterial Pangenomics, 177-189, 2015 | 9 | 2015 |
| Bio4J: An Open source biological data integration platform. P Pareja-Tobes, E Pareja-Tobes, M Manrique, E Pareja, R Tobes IWBBIO, 281, 2013 | 8 | 2013 |
| Escherichia coli EHEC Germany outbreak preliminary functional annotation using BG7 system M Manrique, P Pareja-Tobes, E Pareja-Tobes, E Pareja, R Tobes Nature Precedings, 1-1, 2011 | 6 | 2011 |
| MG7: Configurable and scalable 16S metagenomics data analysis A Alekhin, E Kovach, M Manrique, P Pareja-Tobes, E Pareja, R Tobes, ... BioRxiv, 027714, 2015 | 4 | 2015 |
| Noncontiguous finished genome sequence of Staphylococcus aureus KLT6, a staphylococcal enterotoxin B-positive strain involved in a food poisoning outbreak in Switzerland R Tobes, M Manrique, M Brozynska, R Stephan, E Pareja, S Johler Genome Announcements 1 (3), 2013 | 3 | 2013 |
| Genome sequence of Klebsiella pneumoniae KpQ3, a DHA-1 β-lactamase-producing nosocomial isolate R Tobes, FM Codoñer, E López-Camacho, IJ Salanueva, M Manrique, ... Genome Announcements 1 (1), 2013 | 3 | 2013 |
Raquel TobesEra7 BioinformaticsVerified email at era7.com
