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Giancarlo Croce
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Year
Epistatic models predict mutable sites in SARS-CoV-2 proteins and epitopes
J Rodriguez-Rivas, G Croce, M Muscat, M Weigt
Proceedings of the National Academy of Sciences 119 (4), e2113118119, 2022
612022
A multi-scale coevolutionary approach to predict interactions between protein domains
G Croce, T Gueudré, MV Ruiz Cuevas, V Keidel, M Figliuzzi, H Szurmant, ...
PLoS computational biology 15 (10), e1006891, 2019
262019
Machine learning predictions of MHC-II specificities reveal alternative binding mode of class II epitopes
J Racle, P Guillaume, J Schmidt, J Michaux, A Larabi, K Lau, MAS Perez, ...
Immunity 56 (6), 1359-1375. e13, 2023
222023
Improved predictions of antigen presentation and TCR recognition with MixMHCpred2. 2 and PRIME2. 0 reveal potent SARS-CoV-2 CD8+ T-cell epitopes
D Gfeller, J Schmidt, G Croce, P Guillaume, S Bobisse, R Genolet, ...
Cell Systems 14 (1), 72-83. e5, 2023
222023
FilterDCA: Interpretable supervised contact prediction using inter-domain coevolution
M Muscat, G Croce, E Sarti, M Weigt
PLoS computational biology 16 (10), e1007621, 2020
142020
Predictions of immunogenicity reveal potent SARS-CoV-2 CD8+ T-cell epitopes
D Gfeller, J Schmidt, G Croce, P Guillaume, S Bobisse, R Genolet, ...
bioRxiv, 2022.05. 23.492800, 2022
112022
Both APRIL and antibody-fragment-based CAR T cells for myeloma induce BCMA downmodulation by trogocytosis and internalization
N Camviel, B Wolf, G Croce, D Gfeller, V Zoete, C Arber
Journal for Immunotherapy of Cancer 10 (11), 2022
112022
Deciphering polymorphism in 61,157 Escherichia coli genomes via epistatic sequence landscapes
L Vigué, G Croce, M Petitjean, E Ruppé, O Tenaillon, M Weigt
Nature Communications 13 (1), 4030, 2022
62022
Deep learning predictions of TCR-epitope interactions reveal epitope-specific chains in dual alpha T cells
G Croce, S Bobisse, DL Moreno, J Schmidt, P Guillame, A Harari, ...
Nature Communications 15 (1), 3211, 2024
32024
Adaptive cluster expansion for Ising spin models
S Cocco, G Croce, F Zamponi
The European Physical Journal B 92, 1-17, 2019
32019
Towards a genome-scale coevolutionary analysis
G Croce
Sorbonne Université, 2019
12019
Rapid BCMA downmodulation on myeloma cells upon CAR T cell contact is mediated by trogocytosis and BCMA internalization
N Camviel, B Wolf, G Croce, D Gfeller, V Zoete, C Arber
bioRxiv, 2022.07. 23.501252, 2022
2022
MECHANISMS OF RESISTANCE TO CHIMERIC ANTIGEN RECEPTOR T CELL THERAPY IN MULTIPLE MYELOMA
N Camviel, B Wolf, G Croce, D Gfeller, V Zoete, C Arber
HUMAN GENE THERAPY 33 (7-8), A12-A13, 2022
2022
Epistatic models predict mutable sites in SARS-CoV-2 proteins and epitopes (preprint)
J Rodriguez-Rivas, G Croce, M Muscat, M Weigt
2021
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