| DNA N6-adenine methylation in Arabidopsis thaliana Z Liang, L Shen, X Cui, S Bao, Y Geng, G Yu, F Liang, S Xie, T Lu, X Gu, ... Developmental cell 45 (3), 406-416. e3, 2018 | 197 | 2018 |
| deepEA: a containerized web server for interactive analysis of epitranscriptome sequencing data J Zhai, J Song, T Zhang, S Xie, C Ma Plant Physiology 185 (1), 29-33, 2021 | 11 | 2021 |
| Chromatin accessibility illuminates single-cell regulatory dynamics of rice root tips D Feng, Z Liang, Y Wang, J Yao, Z Yuan, G Hu, R Qu, S Xie, D Li, L Yang, ... BMC biology 20 (1), 274, 2022 | 10 | 2022 |
| Interactive web-based annotation of plant MicroRNAs with iwa-miRNA T Zhang, J Zhai, X Zhang, L Ling, M Li, S Xie, M Song, C Ma Genomics, Proteomics and Bioinformatics 20 (3), 557-567, 2022 | 7 | 2022 |
| easyMF: a web platform for matrix factorization-based gene discovery from large-scale transcriptome data W Ma, S Chen, Y Qi, M Song, J Zhai, T Zhang, S Xie, G Wang, C Ma Interdisciplinary Sciences: Computational Life Sciences 14 (3), 746-758, 2022 | 4 | 2022 |
| Exploring transcriptional switches from pairwise, temporal and population RNA-Seq data using deepTS Z Qiu, S Chen, Y Qi, C Liu, J Zhai, S Xie, C Ma Briefings in Bioinformatics 22 (3), bbaa137, 2021 | 4 | 2021 |
| Artificial intelligence accelerates epigenetics and plant breeding. W Guo, D Li, S Xie, L Yang, C Li, J Tian, L Pu, X Gu | | 2022 |
