| Targeted data extraction of the MS/MS spectra generated by data-independent acquisition: a new concept for consistent and accurate proteome analysis LC Gillet, P Navarro, S Tate, H Röst, N Selevsek, L Reiter, R Bonner, ... Molecular & Cellular Proteomics 11 (6), 2012 | 3030 | 2012 |
| OpenSWATH enables automated, targeted analysis of data-independent acquisition MS data HL Röst, G Rosenberger, P Navarro, L Gillet, SM Miladinović, ... Nature biotechnology 32 (3), 219-223, 2014 | 835 | 2014 |
| OpenMS: a flexible open-source software platform for mass spectrometry data analysis HL Röst, T Sachsenberg, S Aiche, C Bielow, H Weisser, F Aicheler, ... Nature methods 13 (9), 741-748, 2016 | 674 | 2016 |
| Heterogeneous ribosomes preferentially translate distinct subpools of mRNAs genome-wide Z Shi, K Fujii, KM Kovary, NR Genuth, HL Röst, MN Teruel, M Barna Molecular cell 67 (1), 71-83. e7, 2017 | 612 | 2017 |
| diaPASEF: parallel accumulation–serial fragmentation combined with data-independent acquisition F Meier, AD Brunner, M Frank, A Ha, I Bludau, E Voytik, ... Nature methods 17 (12), 1229-1236, 2020 | 551 | 2020 |
| Longitudinal multi-omics of host–microbe dynamics in prediabetes W Zhou, MR Sailani, K Contrepois, Y Zhou, S Ahadi, SR Leopold, ... Nature 569 (7758), 663-671, 2019 | 493 | 2019 |
| BioContainers: an open-source and community-driven framework for software standardization F da Veiga Leprevost, BA Grüning, S Alves Aflitos, HL Röst, J Uszkoreit, ... Bioinformatics 33 (16), 2580-2582, 2017 | 485 | 2017 |
| A repository of assays to quantify 10,000 human proteins by SWATH-MS G Rosenberger, CC Koh, T Guo, HL Röst, P Kouvonen, BC Collins, ... Scientific data 1 (1), 1-15, 2014 | 449 | 2014 |
| From hype to reality: data science enabling personalized medicine H Fröhlich, R Balling, N Beerenwinkel, O Kohlbacher, S Kumar, ... BMC medicine 16, 1-15, 2018 | 431 | 2018 |
| Rapid mass spectrometric conversion of tissue biopsy samples into permanent quantitative digital proteome maps T Guo, P Kouvonen, CC Koh, LC Gillet, WE Wolski, HL Röst, ... Nature medicine 21 (4), 407-413, 2015 | 388 | 2015 |
| Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system BC Collins, LC Gillet, G Rosenberger, HL Röst, A Vichalkovski, ... Nature methods 10 (12), 1246-1253, 2013 | 367 | 2013 |
| A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis P Picotti, M Clément-Ziza, H Lam, DS Campbell, A Schmidt, EW Deutsch, ... Nature 494 (7436), 266-270, 2013 | 351 | 2013 |
| A multicenter study benchmarks software tools for label-free proteome quantification P Navarro, J Kuharev, LC Gillet, OM Bernhardt, B MacLean, HL Röst, ... Nature biotechnology 34 (11), 1130-1136, 2016 | 344 | 2016 |
| Quantitative proteomics: challenges and opportunities in basic and applied research OT Schubert, HL Röst, BC Collins, G Rosenberger, R Aebersold Nature protocols 12 (7), 1289-1294, 2017 | 308 | 2017 |
| Reproducible quantification of cancer-associated proteins in body fluids using targeted proteomics R Hüttenhain, M Soste, N Selevsek, H Röst, A Sethi, C Carapito, T Farrah, ... Science translational medicine 4 (142), 142ra94-142ra94, 2012 | 277 | 2012 |
| Absolute proteome composition and dynamics during dormancy and resuscitation of Mycobacterium tuberculosis OT Schubert, C Ludwig, M Kogadeeva, M Zimmermann, G Rosenberger, ... Cell host & microbe 18 (1), 96-108, 2015 | 231 | 2015 |
| Statistical control of peptide and protein error rates in large-scale targeted data-independent acquisition analyses G Rosenberger, I Bludau, U Schmitt, M Heusel, CL Hunter, Y Liu, ... Nature methods 14 (9), 921-927, 2017 | 222 | 2017 |
| The Mtb proteome library: a resource of assays to quantify the complete proteome of Mycobacterium tuberculosis OT Schubert, J Mouritsen, C Ludwig, HL Röst, G Rosenberger, PK Arthur, ... Cell host & microbe 13 (5), 602-612, 2013 | 210 | 2013 |
| Metabolic dynamics and prediction of gestational age and time to delivery in pregnant women L Liang, MLH Rasmussen, B Piening, X Shen, S Chen, H Röst, JK Snyder, ... Cell 181 (7), 1680-1692. e15, 2020 | 203 | 2020 |
| Integrative personal omics profiles during periods of weight gain and loss BD Piening, W Zhou, K Contrepois, H Röst, GJG Urban, T Mishra, ... Cell systems 6 (2), 157-170. e8, 2018 | 193 | 2018 |
Aebersold RETH ZurichVerified email at imsb.biol.ethz.ch
