| Host metabolites stimulate the bacterial proton motive force to enhance the activity of aminoglycoside antibiotics A Crabbe, L Ostyn, S Staelens, C Rigauts, M Risseeuw, M Dhaenens, ... PLoS Pathogens 15 (4), e1007697, 2019 | 60 | 2019 |
| Removing the hidden data dependency of DIA with predicted spectral libraries B Van Puyvelde, S Willems, R Gabriels, S Daled, L De Clerck, ... Proteomics 20 (3-4), 1900306, 2020 | 51 | 2020 |
| Host intestinal biomarker identification in a gut leakage model in broilers F De Meyer, V Eeckhaut, R Ducatelle, M Dhaenens, S Daled, ... Veterinary Research 50, 1-14, 2019 | 42 | 2019 |
| Cov-MS: a community-based template assay for mass-spectrometry-based protein detection in SARS-CoV-2 patients B Van Puyvelde, K Van Uytfanghe, O Tytgat, L Van Oudenhove, ... Jacs Au 1 (6), 750-765, 2021 | 30 | 2021 |
| A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics B Van Puyvelde, S Daled, S Willems, R Gabriels, A Gonzalez de Peredo, ... Scientific data 9 (1), 126, 2022 | 23 | 2022 |
| The CD147 protein complex is involved in entry of chikungunya virus and related alphaviruses in human cells L De Caluwé, S Coppens, K Vereecken, S Daled, M Dhaenens, ... Frontiers in microbiology 12, 615165, 2021 | 23 | 2021 |
| hSWATH: unlocking SWATH’s full potential for an untargeted histone perspective L De Clerck, S Willems, R Noberini, C Restellini, B Van Puyvelde, ... Journal of proteome research 18 (11), 3840-3849, 2019 | 19 | 2019 |
| An alphaherpesvirus exploits antimicrobial β-defensins to initiate respiratory tract infection J Van Cleemput, KCK Poelaert, K Laval, N Vanderheijden, M Dhaenens, ... Journal of virology 94 (8), 10.1128/jvi. 01676-19, 2020 | 17 | 2020 |
| Comprehensive histone epigenetics: A mass spectrometry based screening assay to measure epigenetic toxicity S Verhelst, L De Clerck, S Willems, B Van Puyvelde, S Daled, D Deforce, ... MethodsX 7, 101055, 2020 | 13 | 2020 |
| Histone sample preparation for bottom-up mass spectrometry: A roadmap to informed decisions S Daled, S Willems, B Van Puyvelde, L Corveleyn, S Verhelst, ... Proteomes 9 (2), 17, 2021 | 10 | 2021 |
| The role of small proteins in Burkholderia cenocepacia J2315 biofilm formation, persistence and intracellular growth H Van Acker, A Crabbé, D Jurėnas, L Ostyn, A Sass, S Daled, ... Biofilm 1, 100001, 2019 | 10 | 2019 |
| A large scale mass spectrometry-based histone screening for assessing epigenetic developmental toxicity S Verhelst, B Van Puyvelde, S Willems, S Daled, S Cornelis, L Corveleyn, ... Scientific reports 12 (1), 1256, 2022 | 7 | 2022 |
| Ion-networks: A sparse data format capturing full data integrity of data independent acquisition mass spectrometry S Willems, S Daled, B Van Puyvelde, L De Clerck, S Vande Casteele, ... bioRxiv, 726273, 2019 | 6 | 2019 |
| Assessing the impact of minimizing arginine conversion in fully defined SILAC culture medium in human embryonic stem cells E Scheerlinck, K Van Steendam, S Daled, E Govaert, L Vossaert, P Meert, ... Proteomics 16 (20), 2605-2614, 2016 | 6 | 2016 |
| The Basigin (CD147)-CD98 protein complex is involved in Chikungunya virus attachment and entry in human cells L De Caluwé, S Coppens, S Daled, M Dhaenens, D Deforce, ... Frontiers in Microbiology 1 (10), 2021 | 5 | 2021 |
| Small RNA NcS27 co-regulates utilization of carbon sources in Burkholderia cenocepacia J2315 AM Sass, S De Waele, S Daled, B Devreese, D Deforce, ... Microbiology 165 (10), 1135-1150, 2019 | 5 | 2019 |
| Microfluidics-based LC-MS MRM approach for the relative quantification of Burkholderia cenocepacia secreted virulence factors S Depluverez, S Daled, S De Waele, S Planckaert, J Schoovaerts, ... Rapid Commun. Mass Spectrom 32 (6), 469-479, 2018 | 5 | 2018 |
| Microfluidics‐based liquid chromatography/mass spectrometry multiple reaction monitoring approach for the relative quantification of Burkholderia cenocepacia secreted virulence … S Depluverez, S Daled, S De Waele, S Planckaert, J Schoovaerts, ... Rapid Communications in Mass Spectrometry 32 (6), 469-479, 2018 | 3 | 2018 |
| An interactive mass spectrometry atlas of histone posttranslational modifications in T-cell acute leukemia L Provez, B Van Puyvelde, L Corveleyn, N Demeulemeester, S Verhelst, ... Scientific data 9 (1), 626, 2022 | 2 | 2022 |
| An experimental design to extract more information from MS-based histone studies L De Clerck, S Willems, S Daled, B Van Puyvelde, S Verhelst, ... Molecular omics 17 (6), 929-938, 2021 | 2 | 2021 |
