| CHANGE-seq reveals genetic and epigenetic effects on CRISPR–Cas9 genome-wide activity CR Lazzarotto, NL Malinin, Y Li, R Zhang, Y Yang, GH Lee, E Cowley, ... Nature biotechnology 38 (11), 1317-1327, 2020 | 173 | 2020 |
| Integrated metabolomic and transcriptome analyses reveal finishing forage affects metabolic pathways related to beef quality and animal welfare JA Carrillo, Y He, Y Li, J Liu, RA Erdman, TS Sonstegard, J Song Scientific reports 6 (1), 25948, 2016 | 84 | 2016 |
| Combined analysis of DNA methylome and transcriptome reveal novel candidate genes with susceptibility to bovine Staphylococcus aureus subclinical mastitis M Song, Y He, H Zhou, Y Zhang, X Li, Y Yu Scientific reports 6 (1), 29390, 2016 | 60 | 2016 |
| The conservation and signatures of lincRNAs in Marek’s disease of chicken Y He, Y Ding, F Zhan, H Zhang, B Han, G Hu, K Zhao, N Yang, Y Yu, ... Scientific reports 5 (1), 15184, 2015 | 55 | 2015 |
| Characterization of Prototheca zopfii Associated with Outbreak of Bovine Clinical Mastitis in Herd of Beijing, China J Gao, H Zhang, J He, Y He, S Li, R Hou, Q Wu, Y Gao, B Han Mycopathologia 173, 275-281, 2012 | 50 | 2012 |
| Association of bovine CD4 and STAT5b single nucleotide polymorphisms with somatic cell scores and milk production traits in Chinese Holsteins Y He, Q Chu, P Ma, Y Wang, Q Zhang, D Sun, Y Zhang, Y Yu, Y Zhang Journal of dairy research 78 (2), 242-249, 2011 | 50 | 2011 |
| Aberrant promoter methylation of the CD4 gene in peripheral blood cells of mastitic dairy cows XS Wang, Y Zhang, YH He, PP Ma, LJ Fan, YC Wang, YI Zhang, DX Sun, ... Genet Mol Res 12 (4), 6228-6239, 2013 | 47 | 2013 |
| Dynamic CTCF binding directly mediates interactions among cis-regulatory elements essential for hematopoiesis Q Qi, L Cheng, X Tang, Y He, Y Li, T Yee, D Shrestha, R Feng, P Xu, ... Blood, The Journal of the American Society of Hematology 137 (10), 1327-1339, 2021 | 31 | 2021 |
| Whole-genome regulation analysis of histone H3 lysin 27 trimethylation in subclinical mastitis cows infected by Staphylococcus aureus Y He, M Song, Y Zhang, X Li, J Song, Y Zhang, Y Yu BMC genomics 17, 1-12, 2016 | 30 | 2016 |
| Genome-wide bovine H3K27me3 modifications and the regulatory effects on genes expressions in peripheral blood lymphocytes Y He, Y Yu, Y Zhang, J Song, A Mitra, Y Zhang, Y Wang, D Sun, S Zhang PloS one 7 (6), e39094, 2012 | 27 | 2012 |
| Long intergenic non-coding RNA GALMD3 in chicken Marek’s disease B Han, Y He, L Zhang, Y Ding, L Lian, C Zhao, J Song, N Yang Scientific reports 7 (1), 10294, 2017 | 23 | 2017 |
| Ruminal transcriptomic analysis of grass-fed and grain-fed angus beef cattle Y Li, JA Carrillo, Y Ding, YH He, C Zhao, L Zan, J Song PLoS One 10 (6), e0116437, 2015 | 22 | 2015 |
| Genome-wide mapping of DNase I hypersensitive sites and association analysis with gene expression in MSB1 cells Y He, JA Carrillo, J Luo, Y Ding, F Tian, I Davidson, J Song Frontiers in genetics 5, 308, 2014 | 22 | 2014 |
| Diet-induced changes in bacterial communities in the jejunum and their associations with bile acids in Angus beef cattle J Liu, F Liu, W Cai, C Jia, Y Bai, Y He, W Zhu, RW Li, J Song Animal Microbiome 2, 1-14, 2020 | 20 | 2020 |
| DNA methylation and regulatory elements during chicken germline stem cell differentiation Y He, Q Zuo, J Edwards, K Zhao, J Lei, W Cai, Q Nie, B Li, J Song Stem Cell Reports 10 (6), 1793-1806, 2018 | 20 | 2018 |
| Novel SNPs in IL-17F and IL-17A genes associated with somatic cell count in Chinese Holstein and Inner-Mongolia Sanhe cattle T Usman, Y Wang, C Liu, Y He, X Wang, Y Dong, H Wu, A Liu, Y Yu Journal of Animal Science and Biotechnology 8, 1-9, 2017 | 19 | 2017 |
| Histone modifications induced by MDV infection at early cytolytic and latency phases A Mitra, J Luo, Y He, Y Gu, H Zhang, K Zhao, K Cui, J Song BMC genomics 16, 1-12, 2015 | 19 | 2015 |
| Differential expression of genes and proteins associated with wool follicle cycling N Liu, H Li, K Liu, J Yu, M Cheng, W De, J Liu, S Shi, Y He, J Zhao Molecular biology reports 41, 5343-5349, 2014 | 19 | 2014 |
| Transcriptomic profiling of spleen in grass-fed and grain-fed Angus cattle Y Li, JA Carrillo, Y Ding, Y He, C Zhao, J Liu, GE Liu, L Zan, J Song PloS one 10 (9), e0135670, 2015 | 18 | 2015 |
| DNA methylation, microRNA expression profiles and their relationships with transcriptome in grass-fed and grain-fed Angus cattle rumen tissue Y Li, JA Carrillo, Y Ding, Y He, C Zhao, J Liu, L Zan, J Song PloS one 14 (10), e0214559, 2019 | 12 | 2019 |
José A. Carrillo TabakmanCDCB - Council on Dairy Cattle BreedingVerified email at umd.edu
