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R. Prabakaran
R. Prabakaran
Verified email at emory.edu
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Year
Protein aggregation: in silico algorithms and applications
R Prabakaran, P Rawat, AM Thangakani, S Kumar, MM Gromiha
Biophysical reviews 13, 71-89, 2021
382021
ANuPP: a versatile tool to predict aggregation nucleating regions in peptides and proteins
R Prabakaran, P Rawat, S Kumar, MM Gromiha
Journal of Molecular Biology 433 (11), 166707, 2021
272021
Aggregation prone regions in human proteome: Insights from large‐scale data analyses
R Prabakaran, D Goel, S Kumar, MM Gromiha
Proteins: Structure, Function, and Bioinformatics 85 (6), 1099-1118, 2017
262017
CPAD 2.0: a repository of curated experimental data on aggregating proteins and peptides
P Rawat, R Prabakaran, R Sakthivel, A Mary Thangakani, S Kumar, ...
Amyloid 27 (2), 128-133, 2020
242020
Exploring the sequence features determining amyloidosis in human antibody light chains
P Rawat, R Prabakaran, S Kumar, MM Gromiha
Scientific Reports 11 (1), 13785, 2021
222021
A novel hybrid SEIQR model incorporating the effect of quarantine and lockdown regulations for COVID-19
R Prabakaran, S Jemimah, P Rawat, D Sharma, MM Gromiha
Scientific reports 11 (1), 24073, 2021
172021
AggreRATE-Pred: a mathematical model for the prediction of change in aggregation rate upon point mutation
P Rawat, R Prabakaran, S Kumar, MM Gromiha
Bioinformatics 36 (5), 1439-1444, 2020
142020
AbsoluRATE: An in-silico method to predict the aggregation kinetics of native proteins
P Rawat, R Prabakaran, S Kumar, MM Gromiha
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1869 (9), 140682, 2021
82021
Evaluation of in silico tools for the prediction of protein and peptide aggregation on diverse datasets
R Prabakaran, P Rawat, S Kumar, MM Gromiha
Briefings in Bioinformatics 22 (6), bbab240, 2021
72021
Understanding the mutational frequency in SARS-CoV-2 proteome using structural features
P Rawat, D Sharma, M Pandey, R Prabakaran, MM Gromiha
Computers in Biology and Medicine 147, 105708, 2022
62022
Effect of charged mutation on aggregation of a pentapeptide: Insights from molecular dynamics simulations
R Prabakaran, P Rawat, N Yasuo, M Sekijima, S Kumar, MM Gromiha
Proteins: Structure, Function, and Bioinformatics 90 (2), 405-417, 2022
32022
Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies
P Rawat, D Sharma, R Prabakaran, F Ridha, M Mohkhedkar, ...
Bioinformatics 38 (16), 4051-4052, 2022
12022
Influence of Amino Acid Properties for Characterizing Amyloid Peptides in Human Proteome
R Prabakaran, R Nikam, S Kumar, MM Gromiha
Intelligent Computing Theories and Application 10362, 541-548, 2017
12017
Functional profiling of the sequence stockpile: a review and assessment of in silico prediction tools
P Ramakrishnan, Y Bromberg
bioRxiv, 2023.07. 12.548726, 2023
2023
Evaluation of in silico tools for the prediction of protein and peptide aggregation on diverse datasets (vol 23, bbab240, 2022)
R Prabakaran, P Rawat, S Kumar, MM Gromiha
BRIEFINGS IN BIOINFORMATICS 23 (1), 2022
2022
Aggregation Nucleation Prediction in Peptides and Proteins. Read more...
R Prabakaran, P Rawat, S Kumar, MM Gromiha, P Rawat
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