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C. Alisha Quandt
C. Alisha Quandt
Assistant Professor, University of Colorado Boulder
Verified email at colorado.edu - Homepage
Title
Cited by
Cited by
Year
A class-wide phylogenetic assessment of Dothideomycetes
CL Schoch, PW Crous, JZ Groenewald, EWA Boehm, TI Burgess, ...
Studies in mycology 64 (1), 1-15, 2009
6692009
A phylogenetically-based nomenclature for Cordycipitaceae (Hypocreales)
RM Kepler, JJ Luangsa-Ard, NL Hywel-Jones, CA Quandt, GH Sung, ...
IMA fungus 8, 335-353, 2017
310*2017
Fungi in the marine environment: Open questions and unsolved problems
A Amend, G Burgaud, M Cunliffe, VP Edgcomb, CL Ettinger, MH Gutiérrez, ...
MBio 10 (2), 10.1128/mbio. 01189-18, 2019
240*2019
Phylogenetic-based nomenclatural proposals for Ophiocordycipitaceae (Hypocreales) with new combinations in Tolypocladium
CA Quandt, RM Kepler, W Gams, JPM Araújo, S Ban, HC Evans, ...
IMA fungus 5 (1), 121-134, 2014
2082014
The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster
KE Bushley, R Raja, P Jaiswal, JS Cumbie, M Nonogaki, AE Boyd, ...
PLoS genetics 9 (6), e1003496, 2013
1862013
Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum
M Peter, A Kohler, RA Ohm, A Kuo, J Krützmann, E Morin, M Arend, ...
Nature communications 7 (1), 12662, 2016
1522016
Leveraging single-cell genomics to expand the fungal tree of life
SR Ahrendt, CA Quandt, D Ciobanu, A Clum, A Salamov, B Andreopoulos, ...
Nature Microbiology 3 (12), 1417-1428, 2018
1112018
The phylogenetic placement of hypocrealean insect pathogens in the genus Polycephalomyces: an application of One Fungus One Name
R Kepler, S Ban, A Nakagiri, J Bischoff, N Hywel-Jones, CA Owensby, ...
Fungal biology 117 (9), 611-622, 2013
1102013
The genome of an intranuclear parasite, Paramicrosporidium saccamoebae, reveals alternative adaptations to obligate intracellular parasitism
CA Quandt, D Beaudet, D Corsaro, J Walochnik, R Michel, N Corradi, ...
Elife 6, e29594, 2017
842017
New 1F1N Species Combinations in Ophiocordycipitaceae (Hypocreales)
JW Spatafora, CA Quandt, RM Kepler, GH Sung, B Shrestha, ...
IMA fungus 6, 357-362, 2015
73*2015
Phylogenetic placement of the ectomycorrhizal genus Cenococcum in Gloniaceae (Dothideomycetes)
JW Spatafora, CA Owensby, GW Douhan, EWA Boehm, CL Schoch
Mycologia 104 (3), 758-765, 2012
622012
A growing pandemic: A review of Nosema parasites in globally distributed domesticated and native bees
AC Grupe, CA Quandt
PLoS pathogens 16 (6), e1008580, 2020
572020
The genome of the truffle-parasite Tolypocladium ophioglossoides and the evolution of antifungal peptaibiotics
CA Quandt, KE Bushley, JW Spatafora
Bmc Genomics 16, 1-14, 2015
502015
Morphological, molecular, and ultrastructural characterization of Rozella rhizoclosmatii, a new species in Cryptomycota
PM Letcher, JE Longcore, CA Quandt, D da Silva Leite, TY James, ...
Fungal biology 121 (1), 1-10, 2017
472017
Metagenome sequence of E laphomyces granulatus from sporocarp tissue reveals A scomycota ectomycorrhizal fingerprints of genome expansion and a P roteobacteria‐rich microbiome
CA Quandt, A Kohler, CN Hesse, TJ Sharpton, F Martin, JW Spatafora
Environmental Microbiology 17 (8), 2952-2968, 2015
392015
Diploid-dominant life cycles characterize the early evolution of Fungi
KR Amses, DR Simmons, JE Longcore, SJ Mondo, K Seto, GH Jerônimo, ...
Proceedings of the National Academy of Sciences 119 (36), e2116841119, 2022
332022
Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides
CA Quandt, Y Di, J Elser, P Jaiswal, JW Spatafora
G3: Genes, Genomes, Genetics 6 (3), 731-741, 2016
282016
Chromosome rearrangements shape the diversification of secondary metabolism in the cyclosporin producing fungus Tolypocladium inflatum
RA Olarte, J Menke, Y Zhang, S Sullivan, JC Slot, Y Huang, ...
BMC genomics 20, 1-23, 2019
242019
Improving fungal cultivability for natural products discovery
T Rämä, CA Quandt
Frontiers in Microbiology 12, 706044, 2021
232021
Phylogenetic advances in Leotiomycetes, an understudied clade of taxonomically and ecologically diverse fungi
CA Quandt, D Haelewaters
Encyclopedia of mycology 1, 284-294, 2021
192021
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Articles 1–20