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Sijia S Dong
Sijia S Dong
Northeastern University
Verified email at northeastern.edu - Homepage
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Year
OpenMolcas: From source code to insight
I Fdez. Galván, M Vacher, A Alavi, C Angeli, F Aquilante, J Autschbach, ...
Journal of chemical theory and computation 15 (11), 5925-5964, 2019
7212019
Automatic selection of an active space for calculating electronic excitation spectra by MS-CASPT2 or MC-PDFT
JJ Bao, SS Dong, L Gagliardi, DG Truhlar
Journal of Chemical Theory and Computation 14 (4), 2017-2025, 2018
622018
The OpenMolcas Web: A Community-Driven Approach to Advancing Computational Chemistry
G Li Manni, I Fdez. Galván, A Alavi, F Aleotti, F Aquilante, J Autschbach, ...
Journal of Chemical Theory and Computation 19 (20), 6933-6991, 2023
532023
Highly Efficient and Diastereoselective Gold(I)‐Catalyzed Synthesis of Tertiary Amines from Secondary Amines and Alkynes: Substrate Scope and Mechanistic Insights
XY Liu, Z Guo, SS Dong, XH Li, CM Che
Chemistry–A European Journal 17 (46), 12932-12945, 2011
442011
Electronic structures of group 9 metallocorroles with axial ammines
SS Dong, RJ Nielsen, JH Palmer, HB Gray, Z Gross, S Dasgupta, ...
Inorganic chemistry 50 (3), 764-770, 2011
222011
Machine learning dielectric screening for the simulation of excited state properties of molecules and materials
SS Dong, M Govoni, G Galli
Chemical Science 12 (13), 4970-4980, 2021
182021
Nature of the 11Bu and 21Ag Excited States of Butadiene and the Goldilocks Principle of Basis Set Diffuseness
SS Dong, L Gagliardi, DG Truhlar
Journal of Chemical Theory and Computation 15 (8), 4591-4601, 2019
172019
Conformational and thermodynamic landscape of GPCR activation from theory and computation
SS Dong, WA Goddard, R Abrol
Biophysical journal 110 (12), 2618-2629, 2016
172016
Assessment of MC-PDFT excitation energies for a set of QM/MM models of rhodopsins
MC Marin, L De Vico, SS Dong, L Gagliardi, DG Truhlar, M Olivucci
Journal of chemical theory and computation 15 (3), 1915-1923, 2019
162019
Targeting oncogenic KRAS with molecular brush-conjugated antisense oligonucleotides
D Wang, Q Wang, Y Wang, P Chen, X Lu, F Jia, Y Sun, T Sun, L Zhang, ...
Proceedings of the National Academy of Sciences 119 (29), e2113180119, 2022
152022
State-interaction pair-density functional theory can accurately describe a spiro mixed valence compound
SS Dong, KB Huang, L Gagliardi, DG Truhlar
The Journal of Physical Chemistry A 123 (10), 2100-2106, 2019
142019
Excitation spectra of retinal by multiconfiguration pair-density functional theory
SS Dong, L Gagliardi, DG Truhlar
Physical Chemistry Chemical Physics 20 (10), 7265-7276, 2018
142018
Computational predictions of corroles as a class of Hsp90 inhibitors
RD Teo, SS Dong, Z Gross, HB Gray, WA Goddard
Molecular BioSystems 11 (11), 2907-2914, 2015
112015
The Predicted Ensemble of Low‐Energy Conformations of Human Somatostatin Receptor Subtype 5 and the Binding of Antagonists
SS Dong, R Abrol, WA Goddard III
ChemMedChem 10 (4), 650-661, 2015
92015
Automated active space selection with dipole moments
BW Kaufold, N Chintala, P Pandeya, SS Dong
Journal of Chemical Theory and Computation 19 (9), 2469-2483, 2023
62023
A Long‐Circulating Vector for Aptamers Based upon Polyphosphodiester‐Backboned Molecular Brushes
Y Wang, D Wang, J Lin, Z Lyu, P Chen, T Sun, C Xue, M Mojtabavi, ...
Angewandte Chemie 134 (41), e202204576, 2022
62022
Extended Hamiltonian molecular dynamics: semiclassical trajectories with improved maintenance of zero point energy
Y Shu, SS Dong, KA Parker, JL Bao, L Zhang, DG Truhlar
Physical Chemistry Chemical Physics 20 (48), 30209-30218, 2018
62018
Identifying multiple active conformations in the G protein-coupled receptor activation landscape using computational methods
SS Dong, WA Goddard III, R Abrol
Methods in Cell Biology 142, 173-186, 2017
62017
A mechanistic study on the cellular uptake, intracellular trafficking, and antisense gene regulation of bottlebrush polymer-conjugated oligonucleotides
L Zhang, Y Wang, P Chen, D Wang, T Sun, Z Zhang, R Wang, X Kang, ...
RSC Chemical Biology 4 (2), 138-145, 2023
42023
Mechanism of halide exchange in reactions of CpRu (PPh 3) 2 Cl with haloalkanes
BS Rich, NB Bissonnette, AD Balsa, M Yang, H Meikle, N Chintala, ...
New Journal of Chemistry 46 (14), 6603-6608, 2022
12022
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