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Jennifer Fouquier
Jennifer Fouquier
University of Colorado, Anschutz Medical Campus
Verified email at cuanschutz.edu
Title
Cited by
Cited by
Year
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
E Bolyen, JR Rideout, MR Dillon, NA Bokulich, CC Abnet, GA Al-Ghalith, ...
Nature Biotechnology 37 (8), 852-857, 2019
138242019
Ecological succession and viability of human-associated microbiota on restroom surfaces
SM Gibbons, T Schwartz, J Fouquier, M Mitchell, N Sangwan, JA Gilbert, ...
Applied and environmental microbiology 81 (2), 765-773, 2015
1312015
Geography and location are the primary drivers of office microbiome composition
J Chase, J Fouquier, M Zare, DL Sonderegger, R Knight, ST Kelley, ...
MSystems 1 (2), e00022-16, 2016
1262016
Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses
J Fouquier, JR Rideout, E Bolyen, J Chase, A Shiffer, D McDonald, ...
Microbiome 4, 1-10, 2016
592016
Citizen science for mining the biomedical literature
G Tsueng, SM Nanis, J Fouquier, BM Good, AI Su
Citizen science: theory and practice 1 (2), 2016
282016
The gut microbiome in autism: study-site effects and longitudinal analysis of behavior change
J Fouquier, N Moreno Huizar, J Donnelly, C Glickman, DW Kang, ...
MSystems 6 (2), 10.1128/msystems. 00848-20, 2021
272021
Rapid assemblage of diverse environmental fungal communities on public restroom floors
J Fouquier, T Schwartz, ST Kelley
Indoor air 26 (6), 869-879, 2016
272016
Intestinal microbial communities and Holdemanella isolated from HIV+/− men who have sex with men increase frequencies of lamina propria CCR5+ CD4+ T cells
E Yamada, CG Martin, N Moreno-Huizar, J Fouquier, CP Neff, ...
Gut Microbes 13 (1), 1997292, 2021
112021
Systems analysis of gut microbiome influence on metabolic disease in HIV-positive and high-risk populations
AJS Armstrong, K Quinn, J Fouquier, SX Li, JM Schneider, NM Nusbacher, ...
MSystems 6 (3), 10.1128/msystems. 01178-20, 2021
72021
Applying citizen science to gene, drug and disease relationship extraction from biomedical abstracts
G Tsueng, M Nanis, JT Fouquier, M Mayers, BM Good, AI Su
Bioinformatics 36 (4), 1226-1233, 2020
62020
EXPLANA: A user-friendly workflow for EXPLoratory ANAlysis and feature selection in cross-sectional and longitudinal microbiome studies
J Fouquier, M Stanislawski, J O'Connor, A Scadden, C Lozupone
bioRxiv, 2024.03. 20.585968, 2024
2024
ghost-tree: a bioinformatics tool for creating hybrid-gene phylogenetic trees with a detailed study of fungal communities in public restrooms
JT Fouquier
San Diego State University, 2015
2015
Impact of building science parameters on microbial communities on indoor surfaces
JA Siegel, M Zare, J Chase, J Fouquier, R Knight, S Kelley, JG Caporaso
13th International Conference on Indoor Air Quality and Climate, Indoor Air 2014, 2014
2014
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Articles 1–13