| Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline S Ou, W Su, Y Liao, K Chougule, JRA Agda, AJ Hellinga, CSB Lugo, ... Genome biology 20, 1-18, 2019 | 659 | 2019 |
| Genome‐wide atlas of transcription during maize development RS Sekhon, H Lin, KL Childs, CN Hansey, CR Buell, N De Leon, ... The Plant Journal 66 (4), 553-563, 2011 | 601 | 2011 |
| Insights into the maize pan-genome and pan-transcriptome CN Hirsch, JM Foerster, JM Johnson, RS Sekhon, G Muttoni, ... The Plant Cell 26 (1), 121-135, 2014 | 537 | 2014 |
| Transposable elements contribute to activation of maize genes in response to abiotic stress I Makarevitch, AJ Waters, PT West, M Stitzer, CN Hirsch, J Ross-Ibarra, ... PLoS genetics 11 (1), e1004915, 2015 | 431 | 2015 |
| An expanded maize gene expression atlas based on RNA sequencing and its use to explore root development SC Stelpflug, RS Sekhon, B Vaillancourt, CN Hirsch, CR Buell, N de Leon, ... The plant genome 9 (1), plantgenome2015.04.0025, 2016 | 334 | 2016 |
| De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes MB Hufford, AS Seetharam, MR Woodhouse, KM Chougule, S Ou, J Liu, ... Science 373 (6555), 655-662, 2021 | 306 | 2021 |
| Single nucleotide polymorphism discovery in elite North American potato germplasm JP Hamilton, CN Hansey, BR Whitty, K Stoffel, AN Massa, A Van Deynze, ... BMC genomics 12, 1-12, 2011 | 249 | 2011 |
| Integration of two diploid potato linkage maps with the potato genome sequence KJ Felcher, JJ Coombs, AN Massa, CN Hansey, JP Hamilton, RE Veilleux, ... PloS one 7 (4), e36347, 2012 | 237 | 2012 |
| Marker density and read depth for genotyping populations using genotyping-by-sequencing TM Beissinger, CN Hirsch, RS Sekhon, JM Foerster, JM Johnson, ... Genetics 193 (4), 1073-1081, 2013 | 226 | 2013 |
| Retrospective View of North American Potato (Solanum tuberosum L.) Breeding in the 20th and 21st Centuries CN Hirsch, CD Hirsch, K Felcher, J Coombs, D Zarka, A Van Deynze, ... G3: Genes, Genomes, Genetics 3 (6), 1003-1013, 2013 | 217 | 2013 |
| RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genome Q Li, JI Gent, G Zynda, J Song, I Makarevitch, CD Hirsch, CN Hirsch, ... Proceedings of the National Academy of Sciences 112 (47), 14728-14733, 2015 | 207 | 2015 |
| Draft assembly of elite inbred line PH207 provides insights into genomic and transcriptome diversity in maize CN Hirsch, CD Hirsch, AB Brohammer, MJ Bowman, I Soifer, O Barad, ... The Plant Cell 28 (11), 2700-2714, 2016 | 193 | 2016 |
| Maize (Zea mays L.) genome diversity as revealed by RNA-sequencing CN Hansey, B Vaillancourt, RS Sekhon, N De Leon, SM Kaeppler, ... PloS one 7 (3), e33071, 2012 | 186 | 2012 |
| Maize gene atlas developed by RNA sequencing and comparative evaluation of transcriptomes based on RNA sequencing and microarrays RS Sekhon, R Briskine, CN Hirsch, CL Myers, NM Springer, CR Buell, ... PloS one 8 (4), e61005, 2013 | 177 | 2013 |
| How the pan-genome is changing crop genomics and improvement R Della Coletta, Y Qiu, S Ou, MB Hufford, CN Hirsch Genome biology 22, 1-19, 2021 | 170 | 2021 |
| Utility of RNA sequencing for analysis of maize reproductive transcriptomes RM Davidson, CN Hansey, M Gowda, KL Childs, H Lin, B Vaillancourt, ... The Plant Genome 4 (3), 2011 | 154 | 2011 |
| The effect of artificial selection on phenotypic plasticity in maize JL Gage, D Jarquin, C Romay, A Lorenz, ES Buckler, S Kaeppler, ... Nature communications 8 (1), 1348, 2017 | 124 | 2017 |
| Genetic diversity of a maize association population with restricted phenology CN Hansey, JM Johnson, RS Sekhon, SM Kaeppler, N De Leon Crop Science 51 (2), 704-715, 2011 | 120 | 2011 |
| Spud DB: A resource for mining sequences, genotypes, and phenotypes to accelerate potato breeding CD Hirsch, JP Hamilton, KL Childs, J Cepela, E Crisovan, B Vaillancourt, ... The Plant Genome 7 (1), plantgenome2013.12.0042, 2014 | 117 | 2014 |
| Natural variation for gene expression responses to abiotic stress in maize AJ Waters, I Makarevitch, J Noshay, LT Burghardt, CN Hirsch, CD Hirsch, ... The Plant Journal 89 (4), 706-717, 2017 | 115 | 2017 |
Natalia de LeonUniversity of Wisconsin, MadisonVerified email at wisc.edu
