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COVID-19 immune features revealed by a large-scale single-cell transcriptome atlas
X Ren, W Wen, X Fan, W Hou, B Su, P Cai, J Li, Y Liu, F Tang, F Zhang, ...
Cell 184 (7), 1895-1913. e19, 2021
6342021
Single-cell analysis of COVID-19, sepsis, and HIV infection reveals hyperinflammatory and immunosuppressive signatures in monocytes
N Liu, C Jiang, P Cai, Z Shen, W Sun, H Xu, M Fang, X Yao, L Zhu, X Gao, ...
Cell Reports 37 (1), 2021
382021
WEDGE: imputation of gene expression values from single-cell RNA-seq datasets using biased matrix decomposition
Y Hu, B Li, W Zhang, N Liu, P Cai, F Chen, K Qu
Briefings in Bioinformatics 22 (5), bbab085, 2021
242021
Dynamics and regulation of mitotic chromatin accessibility bookmarking at single-cell resolution
Q Yu, X Liu, J Fang, H Wu, C Guo, W Zhang, N Liu, C Jiang, Q Sha, ...
Science Advances 9 (4), eadd2175, 2023
52023
A transcriptome atlas and interactive analysis platform for autoimmune disease
Z Shen, M Fang, W Sun, M Tang, N Liu, L Zhu, Q Liu, B Li, R Sun, Y Shi, ...
Database 2022, baac050, 2022
42022
Single-cell landscape of primary central nervous system diffuse large B-cell lymphoma
N Liu, C Jiang, X Yao, M Fang, X Qiao, L Zhu, Z Yang, X Gao, Y Ji, C Niu, ...
Cell Discovery 9 (1), 55, 2023
32023
Histone lysine methyltransferase SMYD3 promotes oral squamous cell carcinoma tumorigenesis via H3K4me3-mediated HMGA2 transcription
Z Yang, F Liu, Z Li, N Liu, X Yao, Y Zhou, L Zhang, P Jiang, H Liu, L Kong, ...
Clinical Epigenetics 15 (1), 92, 2023
32023
WEDGE: recovery of gene expression values for sparse single-cell RNA-seq datasets using matrix decomposition
Y Hu, B Li, N Liu, P Cai, F Chen, K Qu
Brief. Bioinform. bbab085, 2021
22021
Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients
X Ren, W Wen, X Fan, W Hou, B Su, P Cai, J Li, Y Liu, F Tang, F Zhang, ...
bioRxiv, 2020.10. 29.360479, 2020
22020
Comparative analysis of methodologies for detecting extrachromosomal circular DNA
X Gao, K Liu, S Luo, M Tang, N Liu, C Jiang, J Fang, S Li, Y Hou, C Guo, ...
bioRxiv, 2023.12. 01.569546, 2023
12023
Large-scale single-cell analysis reveals critical immune characteristics of COVID-19 patients (preprint)
X Ren, W Wen, X Fan, W Hou, B Su, P Cai, J Li, F Tang, F Zhang, Y Yang, ...
2020
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