| Genetic analyses support the contribution of mRNA N 6-methyladenosine (m6A) modification to human disease heritability Z Zhang, K Luo, Z Zou, M Qiu, J Tian, L Sieh, H Shi, Y Zou, G Wang, ... Nature genetics 52 (9), 939-949, 2020 | 129 | 2020 |
| Allele-specific open chromatin in human iPSC neurons elucidates functional disease variants S Zhang, H Zhang, Y Zhou, M Qiao, S Zhao, A Kozlova, J Shi, AR Sanders, ... Science 369 (6503), 561-565, 2020 | 83 | 2020 |
| Reorganization of 3D genome structure may contribute to gene regulatory evolution in primates IE Eres, K Luo, CJ Hsiao, LE Blake, Y Gilad PLoS genetics 15 (7), e1008278, 2019 | 78 | 2019 |
| N-linked glycan changes of serum haptoglobin β chain in liver disease patients S Zhang, H Shu, K Luo, X Kang, Y Zhang, H Lu, Y Liu Molecular BioSystems 7 (5), 1621-1628, 2011 | 64 | 2011 |
| Mapping nucleosome positions using DNase-seq J Zhong, K Luo, PS Winter, GE Crawford, ES Iversen, AJ Hartemink Genome research 26 (3), 351-364, 2016 | 59 | 2016 |
| Using DNase digestion data to accurately identify transcription factor binding sites K Luo, AJ Hartemink Biocomputing 2013, 80-91, 2013 | 51 | 2013 |
| Silencing of transposable elements may not be a major driver of regulatory evolution in primate iPSCs MC Ward, S Zhao, K Luo, BJ Pavlovic, MM Karimi, M Stephens, Y Gilad Elife 7, e33084, 2018 | 29 | 2018 |
| fastTopics: fast algorithms for fitting topic models and non-negative matrix factorizations to count data P Carbonetto, K Luo, K Dey, J Hsiao, M Stephens R package version 0.4–11, 2021 | 14 | 2021 |
| Altered transcriptional and chromatin responses to rhinovirus in bronchial epithelial cells from adults with asthma BA Helling, DR Sobreira, GT Hansen, NJ Sakabe, K Luo, C Billstrand, ... Communications Biology 3 (1), 678, 2020 | 12 | 2020 |
| A new Bayesian factor analysis method improves detection of genes and biological processes affected by perturbations in single-cell CRISPR screening Y Zhou, K Luo, L Liang, M Chen, X He Nature Methods 20 (11), 1693-1703, 2023 | 5 | 2023 |
| Epigenetic variation impacts ancestry-associated differences in the transcriptional response to influenza infection KA Aracena, YL Lin, K Luo, A Pacis, S Gona, Z Mu, V Yotova, R Sindeaux, ... bioRxiv, 2022.05. 10.491413, 2022 | 5 | 2022 |
| A novel Bayesian factor analysis method improves detection of genes and biological processes affected by perturbations in single-cell CRISPR screening Y Zhou, K Luo, M Chen, X He bioRxiv, 2022.02. 13.480282, 2022 | 4 | 2022 |
| GoM DE: interpreting structure in sequence count data with differential expression analysis allowing for grades of membership P Carbonetto, K Luo, A Sarkar, A Hung, K Tayeb, S Pott, M Stephens Genome Biology 24 (1), 236, 2023 | 3 | 2023 |
| Adjusting for genetic confounders in transcriptome-wide association studies leads to reliable detection of causal genes S Zhao, W Crouse, S Qian, K Luo, M Stephens, X He bioRxiv, 2022.09. 27.509700, 2022 | 3 | 2022 |
| Single-cell genomics improves the discovery of risk variants and genes of cardiac traits A Selewa, K Luo, M Wasney, L Smith, C Tang, H Eckart, I Moskowitz, ... MedRxiv, 2022.02. 02.22270312, 2022 | 3 | 2022 |
| New lysine-acetylated proteins screened by immunoaffinity and liquid chromatography-mass spectrometry B Zhang, C Zhao, KX Luo, GQ Yan, J Yao, YY Wang, HJ Lu, HZ Fan, ... Science China Chemistry 53, 238-244, 2010 | 3 | 2010 |
| Epigenetic variation impacts individual differences in the transcriptional response to influenza infection KA Aracena, YL Lin, K Luo, A Pacis, S Gona, Z Mu, V Yotova, R Sindeaux, ... Nature Genetics, 1-12, 2024 | 2 | 2024 |
| Adjusting for genetic confounders in transcriptome-wide association studies improves discovery of risk genes of complex traits S Zhao, W Crouse, S Qian, K Luo, M Stephens, X He Nature Genetics, 1-12, 2024 | 2 | 2024 |
| Reorganization of 3D Genome Structure May Contribute to Gene Regulatory Evolution in Primates. bioRxiv IE Eres, K Luo, CJ Hsiao, LE Blake, Y Gilad Cold Spring Harbor Laboratory, 2018 | 2 | 2018 |
| Single-cell genomics improves the discovery of risk variants and genes of atrial fibrillation A Selewa, K Luo, M Wasney, L Smith, X Sun, C Tang, H Eckart, ... Nature Communications 14 (1), 4999, 2023 | 1 | 2023 |
Matthew StephensUniversity of ChicagoVerified email at uchicago.edu
