| Coalescent-based species tree inference from gene tree topologies under incomplete lineage sorting by maximum likelihood Y Wu Evolution 66 (3), 763-775, 2012 | 147 | 2012 |
| Automated modular fixture planning: geometric analysis Y Wu, Y Rong, W Ma, SR LeClair Robotics and Computer-Integrated Manufacturing 14 (1), 1-15, 1998 | 112 | 1998 |
| An improved approach for accurate and efficient calling of structural variations with low-coverage sequence data J Zhang, J Wang, Y Wu BMC Bioinformatics 13 (Suppl 6), S6, 2012 | 96 | 2012 |
| Automated modular fixture planning: Accuracy, clamping, and accessibility analyses Y Wu, Y Rong, W Ma, SR LeClair Robotics and Computer-Integrated Manufacturing 14 (1), 17-26, 1998 | 83 | 1998 |
| Alterations of host-gut microbiome interactions in multiple sclerosis C Cantoni, Q Lin, Y Dorsett, L Ghezzi, Z Liu, Y Pan, K Chen, Y Han, Z Li, ... EBioMedicine 76, 2022 | 71 | 2022 |
| Genomic takeover by transposable elements in the strawberry poison frog RL Rogers, L Zhou, C Chu, R Márquez, A Corl, T Linderoth, L Freeborn, ... Molecular Biology and Evolution 35 (12), 2913-2927, 2018 | 68 | 2018 |
| Close lower and upper bounds for the minimum reticulate network of multiple phylogenetic trees Y Wu Bioinformatics 26 (12), i140-i148, 2010 | 63 | 2010 |
| Efficient computation of close lower and upper bounds on the minimum number of recombinations in biological sequence evolution YS Song, Y Wu, D Gusfield Bioinformatics 21 (suppl_1), i413-i422, 2005 | 63 | 2005 |
| REPdenovo: Inferring De Novo Repeat Motifs from Short Sequence Reads C Chu, R Nielsen, Y Wu PloS one 11 (3), e0150719, 2016 | 62 | 2016 |
| A practical method for exact computation of subtree prune and regraft distance Y Wu Bioinformatics 25 (2), 190-196, 2009 | 62 | 2009 |
| SVseq: an approach for detecting exact breakpoints of deletions with low-coverage sequence data J Zhang, Y Wu Bioinformatics 27 (23), 3228-3234, 2011 | 54 | 2011 |
| A draft genome sequence of the elusive giant squid, Architeuthis dux RR Da Fonseca, A Couto, AM Machado, B Brejova, CB Albertin, F Silva, ... GigaScience 9 (1), giz152, 2020 | 43 | 2020 |
| DeepSV: accurate calling of genomic deletions from high-throughput sequencing data using deep convolutional neural network L Cai, Y Wu, J Gao BMC bioinformatics 20, 1-17, 2019 | 43 | 2019 |
| Fast computation of the exact hybridization number of two phylogenetic trees Y Wu, J Wang International Symposium on Bioinformatics Research and Applications, 203-214, 2010 | 36 | 2010 |
| An algorithm for constructing parsimonious hybridization networks with multiple phylogenetic trees Y Wu Journal of Computational Biology 20 (10), 792-804, 2013 | 34 | 2013 |
| Algorithms to distinguish the role of gene-conversion from single-crossover recombination in the derivation of SNP sequences in populations YS Song, Z Ding, D Gusfield, CH Langley, Y Wu Research in Computational Molecular Biology: 10th Annual International …, 2006 | 34 | 2006 |
| CircMarker: a fast and accurate algorithm for circular RNA detection X Li, C Chu, J Pei, I Măndoiu, Y Wu BMC genomics 19, 79-87, 2018 | 33 | 2018 |
| RENT+: an improved method for inferring local genealogical trees from haplotypes with recombination S Mirzaei, Y Wu Bioinformatics 33 (7), 1021-1030, 2017 | 33 | 2017 |
| Algorithms for imperfect phylogeny haplotyping (IPPH) with a single homoplasy or recombination event YS Song, Y Wu, D Gusfield International Workshop on Algorithms in Bioinformatics, 152-164, 2005 | 32 | 2005 |
| Association mapping of complex diseases with ancestral recombination graphs: models and efficient algorithms Y Wu Journal of Computational Biology 15 (7), 667-684, 2008 | 30 | 2008 |
dan gusfieldUniversity of California DavisVerified email at cs.ucdavis.edu
