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Tobias Hüfner
Tobias Hüfner
Other namesTobias Wulsdorf, Tobias Hüfner-Wulsdorf
Verified email at biophys.mpg.de
Title
Cited by
Cited by
Year
Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes
J Schiebel, R Gaspari, T Wulsdorf, K Ngo, C Sohn, TE Schrader, A Cavalli, ...
Nature communications 9 (1), 3559, 2018
1692018
Impact of surface water layers on protein–ligand binding: how well are experimental data reproduced by molecular dynamics simulations in a thermolysin test case?
M Betz, T Wulsdorf, SG Krimmer, G Klebe
Journal of Chemical Information and Modeling 56 (1), 223-233, 2016
432016
Paradoxically, most flexible ligand binds most entropy-favored: intriguing impact of ligand flexibility and solvation on drug–kinase binding
B Wienen-Schmidt, HRA Jonker, T Wulsdorf, HD Gerber, K Saxena, ...
Journal of Medicinal Chemistry 61 (14), 5922-5933, 2018
402018
Price for opening the transient specificity pocket in human aldose reductase upon ligand binding: structural, thermodynamic, kinetic, and computational analysis
C Rechlin, F Scheer, F Terwesten, T Wulsdorf, E Pol, V Fridh, P Toth, ...
ACS Chemical Biology 12 (5), 1397-1415, 2017
282017
Protein–ligand complex solvation thermodynamics: Development, parameterization, and testing of GIST-based solvent functionals
T Hüfner-Wulsdorf, G Klebe
Journal of Chemical Information and Modeling 60 (3), 1409-1423, 2020
222020
Conformational changes in alkyl chains determine the thermodynamic and kinetic binding profiles of carbonic anhydrase inhibitors
S Glöckner, K Ngo, CP Sager, T Hüfner-Wulsdorf, A Heine, G Klebe
ACS Chemical Biology 15 (3), 675-685, 2020
172020
Strategies for late-stage optimization: Profiling thermodynamics by preorganization and salt bridge shielding
A Sandner, T Hüfner-Wulsdorf, A Heine, T Steinmetzer, G Klebe
Journal of Medicinal Chemistry 62 (21), 9753-9771, 2019
172019
A False‐Positive Screening Hit in Fragment‐Based Lead Discovery: Watch out for the Red Herring
J Cramer, J Schiebel, T Wulsdorf, K Grohe, EE Najbauer, FR Ehrmann, ...
Angewandte Chemie International Edition 56 (7), 1908-1913, 2017
162017
Role of water molecules in protein–ligand dissociation and selectivity discrimination: analysis of the mechanisms and kinetics of biomolecular solvation using molecular dynamics
T Hüfner-Wulsdorf, G Klebe
Journal of Chemical Information and Modeling 60 (3), 1818-1832, 2020
152020
Elucidating the origin of long residence time binding for inhibitors of the metalloprotease thermolysin
J Cramer, SG Krimmer, V Fridh, T Wulsdorf, R Karlsson, A Heine, G Klebe
ACS Chemical Biology 12 (1), 225-233, 2017
152017
On the Implication of Water on Fragment‐to‐Ligand Growth in Kinase Binding Thermodynamics
B Wienen‐Schmidt, T Wulsdorf, HRA Jonker, K Saxena, D Kudlinzki, ...
ChemMedChem 13 (18), 1988-1996, 2018
82018
Mapping Water Thermodynamics on Drug Candidates via Molecular Building Blocks: a Strategy to Improve Ligand Design and Rationalize SAR
T Hüfner-Wulsdorf, G Klebe
Journal of Medicinal Chemistry 64 (8), 4662-4676, 2021
72021
Diamondoid Amino Acid‐Based Peptide Kinase A Inhibitor Analogues
J Müller, RA Kirschner, JP Berndt, T Wulsdorf, A Metz, R Hrdina, ...
ChemMedChem 14 (6), 663-672, 2019
72019
Advancing GIST-based solvent functionals through multiobjective optimization of solvent enthalpy and entropy scoring terms
T Hüfner-Wulsdorf, G Klebe
Journal of Chemical Information and Modeling 60 (12), 6654-6665, 2020
62020
Fragment screening hit draws attention to a novel transient pocket adjacent to the recognition site of the tRNA-modifying enzyme TGT
E Hassaan, C Hohn, FR Ehrmann, FW Goetzke, L Movsisyan, ...
Journal of medicinal chemistry 63 (13), 6802-6820, 2020
62020
Falsch‐positiver Treffer im Fragment‐basierten Wirkstoffdesign: Lass Dich nicht auf die falsche Fährte locken!
J Cramer, J Schiebel, T Wulsdorf, K Grohe, EE Najbauer, FR Ehrmann, ...
Angewandte Chemie 129 (7), 1934-1940, 2017
12017
Mutational Studies of Aldose Reductase to Trace a Transient Pocket Opening and to Explain Ligand Affinity Cliffs
LS Klee, M Gárdonyi, T Hüfner, A Heine, G Klebe
ChemMedChem 18 (15), e202300222, 2023
2023
Approaching temporal structure and stability of protein-water interactions by using local correlations: The local correlation analysis method
T Wulsdorf, G Klebe
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019
2019
New semi-empirical solvent functionals for structure-based drug discovery: Routes to customized solvent thermodynamics
T Wulsdorf, G Klebe
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019
2019
Thermodynamics of preorganization: A combined experimental and computational study on a congeneric series of thrombin ligands
T Wulsdorf, A Sandner, G Klebe
ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 257, 2019
2019
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